Gossypium hirsutum (upland cotton): 107935146
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Entry
107935146 CDS
T04793
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107935146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107935146
03036 Chromosome and associated proteins [BR:
ghi03036
]
107935146
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
107935146
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
107935146
RSF complex
107935146
WICH complex
107935146
B-WICH complex
107935146
NORC complex
107935146
BRF complex
107935146
NuRF complex (fruit fly)
107935146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
DEAD
HDA2-3
DBINO
CHDII_SANT-like
AAA_14
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
107935146
NCBI-ProteinID:
XP_016723192
UniProt:
A0A1U8M8P6
LinkDB
All DBs
Position
A09:complement(84592284..84598644)
Genome browser
AA seq
1052 aa
AA seq
DB search
MAKLSKPTSSDEALSDGSSSSEEERIDDQINGDEDDEEELEAVARSAGASDEDEDDDAAP
DANADDAYEYESNGAEPDISKREKERLKEMEKLKKQKIQEILDAQNAAIDADMNNKGKGR
LKYLLQQTELFAHFSKGEQSSSQKKVKGRGRHSSKVTEEEEDEEYLKEEEDGLSGNTRLV
TQPTCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEYRGITG
PHMVVAPKSTLGNWVNEIRRFCPVLRTVKFLGNPEERRYIREELLVAGKFDVCVTSFEMA
IKEKSALRRFSWRYIVIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWAL
LNFLLPEIFSSAETFDEWFQISGENEAQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKET
ILKVGMSQMQKHYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPY
TTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGN
TGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDR
AHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMV
RFGAEMVFSSKDSTITDEDIDRIIAKGEAATAELDAKMKKFTEDAIKFKMDDTAELYDFD
DEKDENKFDFKKIATENWIEPPKRERKRNYSESEYFKQTLRQGGPAKPKEPRIPRMPQLH
DFQFFNTQRLSDLYEKEVRYLMQTHQKNQIKDSIDEAEPEEGGDPLTAEELEEKEQLLEE
GFSSWSRRDFNTFIRACEKYGRNDIKSIASEMEGKTEEEVQRYAKVFKERYKELNDYDRI
IKNIERGEARISRKDEIKKAIGKKLDRYKNPWLEMKIQYGQNKGKLYNEECDRFMICMVH
KLGYGNWEELKAAFRMSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQAR
KEKKLAKNMTPSKRGGRQPIESPAQPKKPKHF
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagttatcgaaaccgacgtcgtccgatgaagcattatccgatggttccagttca
tcggaagaagagaggattgacgatcagatcaacggcgatgaagacgatgaagaagagctc
gaagccgtcgctcgttccgccggtgcttccgatgaagacgaagatgatgacgctgcacct
gatgcaaacgcggatgatgcttacgagtatgagtctaacggggctgaaccagatattagt
aagcgagaaaaggagaggttaaaagaaatggagaaactaaagaagcagaagattcaggaa
atattggatgctcaaaatgccgccattgatgctgatatgaataacaaggggaaggggcgt
ttgaagtatcttttgcagcagacggagttgtttgctcatttttctaaaggtgaacaatca
tcatcgcaaaagaaggtgaaaggaaggggacgtcattcatcaaaagtaaccgaggaggaa
gaagatgaagagtacctcaaggaggaagaagatggtttgtctggaaacacgcgattggtc
actcaacctacttgtattcaaggaaaaatgagggactaccaacttgctggtttaaattgg
cttatacgactgtatgagaatggtataaatggaattcttgctgatgaaatgggtcttggg
aaaactttgcaaactatttctttattgggctatctgcatgagtaccggggaattactggc
cctcacatggttgttgctccaaaatcaactctcggtaactgggtgaatgaaattcgtcga
ttctgcccagtcctgcgaactgtaaaatttcttgggaatcctgaagaaagaagatacatt
cgtgaggagctacttgttgctgggaagtttgatgtctgtgtcacaagttttgagatggcc
attaaggagaagtctgccttgcgccgttttagttggcgctatatagttattgatgaagcc
catcggatcaagaatgagaattcacttctttcaaaaacaatgaggctctacaacactaat
taccgtcttcttattactggtactccacttcagaataatctccatgagctctgggctctt
cttaactttctactgccagagatttttagttcggctgaaacttttgatgagtggtttcag
atttctggtgaaaatgaagcgcaggaagttgttcaacaacttcacaaggttcttcggcca
tttctccttcgaagattgaaatcagatgttgaaaaaggtttgcctcccaaaaaggaaact
atcctgaaagtaggaatgtcccagatgcagaaacattactacagggctttgctgcaaaaa
gatcttgaagttgttaatgctggtggagagcgtaagcgtcttctgaacattgcaatgcag
ctgcgtaaatgctgtaatcacccatatctttttcaaggtgctgaacctggacctccatat
actacaggggaccatcttataaccaatgctggcaaaatggttctcttggacaagctactg
ccaaagctaaaggagcgtgattctagagttctgatattttctcagatgacaaggttgctg
gatattcttgaagattatttgatgttccgtgggtacctgtattgtcggattgatggtaat
acgggtggagaagaccgtgatgcttctattgaagcctttaataagccaggaagtgagaaa
tttgttttcttgttatcaactagagctggaggtcttggtattaatcttgctacagcagat
gttgtcatcctttatgatagtgactggaatccacaagttgatctgcaagcacaggatcgt
gctcatagaattggtcaaaagaaggaagttcaagtgtttcgcttttgcacggagtacact
attgaggaaaaggtgatagagagggcctacaaaaagcttgccctagatgctctggttatt
caacaaggacgattagcagagcagaagactgttaacaaagatgagttgcttcaaatggtg
agatttggtgctgaaatggtctttagttccaaggatagcacaattacagatgaagacatt
gatagaatcattgccaaaggagaagcagcaacagctgaacttgatgccaagatgaagaaa
tttacagaggatgctattaaatttaagatggatgatactgctgaattgtatgattttgat
gatgaaaaggatgaaaacaagtttgacttcaagaaaattgcaactgaaaattggattgag
cctccaaaaagagagcgaaagcggaattactcagaatctgagtactttaaacaaaccctg
cgccaaggtggtccagcaaaaccaaaggaacctcgaattcctcgcatgcctcaactgcat
gatttccagttttttaacactcagaggctaagtgacttgtatgagaaagaagtgcgctat
cttatgcaaacccatcagaagaatcagataaaggattcaattgatgaggctgaacctgaa
gaaggtggagatccactaactgctgaagaattggaagaaaaggaacaactattagaagag
gggttttcttcatggagcagaagagatttcaatactttcataagagcttgtgagaagtat
ggacgaaatgatataaaaagtattgcttcagaaatggaaggcaaaactgaggaggaagtt
caacgatatgctaaagtttttaaagaacgatacaaggagttaaatgattatgataggata
ataaagaacattgaaagaggggaagccagaatctctagaaaagatgagatcaagaaagca
attggcaagaaattggatcgctacaagaatccatggctggaaatgaagatccagtatggt
caaaacaaagggaagctgtacaatgaagaatgtgatcggttcatgatatgtatggttcac
aagcttggatatgggaattgggaggaattgaaggcagcattcagaatgtctcctttgttt
cgatttgattggttcgttaagtcacggacaactcaagagctggcaaggagatgcgatacc
ctcatccggttggttgagaaggaaaatcaagaatatgacgagagggagcgacaagcccgc
aaggagaagaaacttgccaagaacatgacaccatctaagcgaggtgggaggcagccgatt
gagagtcctgctcaaccgaagaaaccaaaacatttttag
DBGET
integrated database retrieval system
