Gossypium hirsutum (upland cotton): 107935159
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Entry
107935159 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6-like isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107935159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107935159
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107935159
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
HECT type E3
107935159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
107935159
NCBI-ProteinID:
XP_040933286
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All DBs
Position
A09:complement(84675013..84684539)
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AA seq
1032 aa
AA seq
DB search
MFFSGDPTTRKRVDLGGRSSKERDRQKLLEQTRLERNRRLWLRQQNSAALKIQKYFRGRK
VVEVERAKVREQFYKTYGKHCHHVDRHCFGPDSEFLRQLIFFVNAWNMNDFSVLVETCRL
IQHFVRESGDVVELFAGTDYLSNHSLVVYRLKRLSFACIQAIHHNRNKLKDQLLMTGEEP
SASTAILLQALVLILDPKLPWACKTVGYLLQRNVFSLFREVILTAKENINAKGSFGKVSA
LEHVLACMVSHVGQSPCICTNVDPQWSFSFQILTIPFLWKKFPYLKEVFASRSLTQYYTN
QMALCVQNHANVLPTDMLNEFPGYACILGNILETTGAALSQPDCSFEMALDLAAVTTYLL
EALPPIKSSSRESSTVGEDDMIIGDESVEIVLDDNLQQQITNAIDSRFLVQLTNVLFGGI
STAHGSHNEGPDDKEVAAVAAACAFLHVTFNTLPLERIMTVLAYRTELVPVLWNFMKRCH
ENQKWSSLPERFSYLLGDAPGWLLPLSVFCPVYKHMLMIVDNEEFYEQEKPLSLKDVRCL
IVILRQALWQILWVNPSAHPSSGKFISNTSGHKKHPVEAIQSRVGTVASELLSQLQDWNN
RRQFTPPSDFHADGVNDYFISQAVTEGTKAHDILKQAPFLIPFTSRVKIFTSQLASVRQR
QEAHGVFTRNRFRIRRDHILEDAYNQMSALSEEDLRGLIRVTFVNEFGVEEPGIDGGGIF
KDFMENITRAAFDVQYGLFKETADHLLYPNPGSGMIHEQHLQFFHFLGSLLAKAMFEGIL
VDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYKEDISELELYFVIVNNEYGE
QTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSTHFLRGFQQLMRKEWIDMFN
EHELQLLISGSLDSLDVDDLRQNTNYAGGYHGEHYVIDMFWEVLKSFSLENQKKFLKFVT
GCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPPYGSKEQLETKLL
YAINADAGFDLS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctcgggtgatccgactactcggaaacgggttgatttgggcggtcggagctcc
aaagagagagataggcagaaacttcttgaacaaacgcgtttggaacgcaatcgccgtctt
tggttgcgccagcaaaattctgcagctctcaagattcagaaatacttcagagggagaaag
gtagtggaagttgaacgagccaaggtgcgagagcagttctacaaaacttatggaaagcac
tgccatcatgtagacaggcattgttttggtccagactcagagtttctccgccagctaatt
ttctttgtcaatgcatggaatatgaatgatttttctgttcttgttgagacttgccgatta
attcagcattttgttcgagaaagtggggatgtcgtggaactctttgcaggcacggactac
ttatccaatcattctttggttgtctacaggttgaagcgactctcatttgcttgcattcag
gctatacatcacaacagaaataaattgaaagatcaactgttgatgacgggagaggagcct
agtgcatcaacagccatattgcttcaagcattggttttgatattagaccctaaactgcca
tgggcttgtaagacagttggttatctcttgcaaagaaatgtattctctctgtttagagaa
gttattttaactgcaaaggaaaacataaatgctaaaggttcttttgggaaagtatctgcg
ttagagcatgtgcttgcttgtatggtttctcatgttggtcagagtccatgtatttgcaca
aatgtggatccccagtggagtttctcattccaaattcttacaatccctttcttatggaaa
aaattcccatacttaaaagaggtttttgcttctcggagcttgacccaatactacactaat
cagatggctttgtgtgtgcaaaaccatgctaatgtacttcccactgatatgttgaatgag
tttcctggttatgcctgcattcttggtaatatattagaaacaacaggtgctgctttatct
cagcccgactgctcatttgaaatggccttagaccttgcagcagttacaacatacttattg
gaagctcttcctcctataaaatcttcaagcagagaaagttctacagttggggaggatgac
atgataattggtgatgaatcagtggaaattgttttggatgataatttgcaacagcagata
acaaatgctattgattcacgttttcttgtgcaattgactaatgtgttatttggagggatt
tccactgcccatggttcacataatgaaggcccagatgataaggaggtggcagctgttgca
gctgcgtgtgcttttttgcatgttacattcaatactttacctctagagagaatcatgact
gtactagcatatagaactgaacttgttccagtgctttggaattttatgaagcgatgtcat
gaaaatcaaaagtggtcatccttgcctgagcgcttttcatatcttctgggagatgcacct
ggttggttgctacctctgtccgttttttgtccagtgtacaagcacatgcttatgatagtt
gataatgaggagttttatgagcaggagaagcctctgtctttgaaggatgtcagatgccta
attgtcattctgagacaggctttgtggcagatcctatgggtgaatccttcagctcacccc
agttctgggaaattcatctccaacacttctggtcataagaagcaccctgttgaagctatt
caaagtagggttggtactgtagcctctgagctgctatcccagttgcaagattggaataac
cggcggcagttcactccccctagtgacttccatgctgatggtgtaaatgactattttatt
tctcaggctgtaacggaaggcacaaaagcgcatgacatattgaagcaagcacctttcttg
attccattcactagcagagttaaaatattcacttcacaactagcctcagtcaggcagaga
caagaggctcatggtgtttttaccagaaaccggttcagaatacgaagggatcatattctg
gaagatgcgtataatcagatgagtgcattatccgaagaggatcttagaggactgattcgt
gtaacatttgtcaatgaatttggagtggaggaacctggtatcgatggcggtggaattttc
aaagattttatggagaatattactcgagctgcatttgacgtgcagtatgggttatttaag
gaaacagctgatcaccttttatacccaaatcctggttcgggaatgatacatgaacaacac
ctccaatttttccatttcttgggatcactccttgctaaggccatgtttgaaggaattctt
gtagatataccatttgcaacattcttcttgagcaaattgaaacaaaagtacaactattta
aatgatttgccttccttggaccctgagttatatcgtcaccttattttcttgaagcattat
aaagaggacatttcagagttggagctctactttgtaattgtgaataatgaatatggagag
caaacagaagaagagctgcttccaggaggcaaaaacattcgtgttactaatgagaatgtt
atcacatttattcatcttgtatctaaccaccgattgaattttcagatacgacaacaaagt
acacatttccttaggggatttcagcaacttatgcggaaagagtggattgatatgtttaat
gaacacgagttgcagcttctgatatcaggttcacttgacagcttggatgttgatgaccta
cgacagaacactaattatgcagggggctatcatggtgagcactatgtcattgatatgttt
tgggaagtcctcaaaagcttttctctggaaaaccaaaagaaatttttgaagtttgtgact
ggttgttcccgaggaccgttgctgggattcaaatatcttgaacctttattttgcatacaa
agagccgctggaagtgcctctgaagaagcattggaccggttaccaacgtctgcgacttgt
atgaaccttttaaagcttccaccatacggaagcaaagagcaactggaaaccaaattgcta
tatgctataaatgcagatgctggttttgatttgagttga
DBGET
integrated database retrieval system
