Gossypium hirsutum (upland cotton): 107935236
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Entry
107935236 CDS
T04793
Name
(RefSeq) tubulin alpha-5 chain
KO
K07374
tubulin alpha
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04145
Phagosome
ghi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107935236
09142 Cell motility
04814 Motor proteins
107935236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107935236
03036 Chromosome and associated proteins [BR:
ghi03036
]
107935236
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107935236
04147 Exosome [BR:
ghi04147
]
107935236
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107935236
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
107935236
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
107935236
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107935236
Exosomal proteins of other body fluids (saliva and urine)
107935236
Exosomal proteins of colorectal cancer cells
107935236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
107935236
NCBI-ProteinID:
XP_016723297
UniProt:
A0A1U8M8Z5
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All DBs
Position
D11:complement(52793956..52801210)
Genome browser
AA seq
449 aa
AA seq
DB search
MREVISIHIGQAGIQVGNACWELYCLEHGIEPDGMMPGDTSVGACHDAFNTFFSETGSGK
HVPRAIFVDLEPTVIDEVRSGAFRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERFSVDYGKKSKLGFTIFPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYNNLNRLISQIISSLTT
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITSAVFEPSS
MMAKCDPRHGKYMACYLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
TVVPGGDLARVQRAVCMISNNTSVAEVFSRIDHKFDLMYANRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGGEDEEEPEDY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagggaagtgatcagcattcatattgggcaagctggaattcaggttgggaatgcttgt
tgggagctttactgccttgaacatggaattgaacctgatgggatgatgcctggtgacacc
tctgtgggtgcttgccatgatgctttcaataccttctttagcgagaccgggtccggcaag
catgtgccgagagctatatttgttgatctagagcccactgtgattgatgaagttagatct
ggggcttttagacaactctttcatccagagcagcttatttctggcaaggaagatgctgct
aacaactttgctagaggacattatacagttggtagggagattgtggatctttgccttgac
cgaataagaaaattggctgacaactgtactggtctgcaaggatttttggtattcaatgct
gttggtggtggaactggttctggtttgggttcattgcttttggagcgcttttctgttgac
tatggaaagaagtcaaaactcggcttcaccatcttcccttctcctcaggtttctactgcc
gttgtggaaccttacaatagcgtgctctcaactcattctctccttgaacacacagatgtg
gcggtgcttcttgacaatgaagctatatatgatatctgtaggagatccttagacattgaa
aggccgacttataacaacttgaaccgattgatatcccaaattatatcttctttgaccact
tcattgaggtttgatggtgccataaatgtagacattacagagtttcagactaaccttgtg
ccatatcctcgtatccatttcatgctttcatcatatgcaccagtaatctcagctgcaaag
gcttaccatgagcagctatcggttcccgagattacaagtgctgtttttgaaccctcaagc
atgatggctaaatgtgatccaaggcatgggaagtacatggcatgttatttaatgtaccgt
ggagacgttgtacccaaggatgtcaatgctgctgttgctaccatcaaaactaagcggact
gttcagtttgtagactggtgtcctactggtttcaagtgtggtatcaactatcagccaccc
acagtggtaccaggaggtgatcttgctcgggtgcaacgagcagtgtgtatgatcagtaac
aacacatctgtggccgaggttttctcccgaattgaccacaagtttgatctcatgtatgcc
aacagagcctttgttcactggtatgtaggtgagggaatggaggaaggtgaattctccgaa
gcccgggaagatcttgctgctcttgagaaagactacgaggaagttggggcagaaggtggt
gaagatgaagaagaaccagaagattactag
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