Gossypium hirsutum (upland cotton): 107935238
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Entry
107935238 CDS
T04793
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit E
KO
K03250
translation initiation factor 3 subunit E
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ghi03012
]
107935238
03051 Proteasome [BR:
ghi03051
]
107935238
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107935238
Translation factors [BR:
ghi03012
]
Eukaryotic type
Initiation factors
eIF-3
107935238
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
107935238
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107935238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3_N
PCI
EIF3E_C
RPN7
TPR_14
TPR_9
TPR_20
TPR_19
Motif
Other DBs
NCBI-GeneID:
107935238
NCBI-ProteinID:
XP_040936160
LinkDB
All DBs
Position
A11:complement(121512720..121515978)
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AA seq
437 aa
AA seq
DB search
MATYDLTPRIGPNLDRHLVFPLLEFLQERQLYPDEQILKAKIELLNKTNMVDYAMDIHKS
LYHTDDVPQDMVERRVEVVARLKALEDAAAPLVTFLQNPNAVQELRADKQYNLQMLNDRY
QIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEILMQNW
DIALEELNRLKEIIDSKSFSSPLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYL
NAIQTSAPHLLRYLATAFIVNKRRRPQFKEFIKVIQQDQCSYKDPITEFLACVYVNYEFD
GAQKKMKECEEVILNDPFLGKRVEEGNFSTVPLKDEFLENARLFIFETYCRIHQRIDMGV
LFEKLNLNYEEGERWIVNLIRNSKLDAKIDSKTGTVIMEPNQPNVYEQLIDHTKALQGRT
YKLVGQLLEHAQAQPAR
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttacgatctaaccccgcgtatcggcccgaacctagacaggcacttagtgttt
ccattgctggagttcttgcaagagcgacaactatacccagatgaacagatcttgaaagca
aagatcgagcttttgaacaagacaaatatggtcgattacgctatggatatccataagagc
ctttaccacaccgatgatgtccctcaggacatggtcgagaggagagtcgaggttgtcgct
cgtctcaaagctttggaagatgccgccgctcctctcgtcactttcttgcaaaaccctaac
gctgttcaggaattgcgtgctgataaacagtataatctccagatgcttaatgaccgctac
cagattggtccagatcaaatagaggcattatatcagtatgcaaaattccaatttgagtgt
ggcaactactctggtgctgctgactatctgtatcagtatcgggcattatgtactaacagc
gaaaggagtttgagtgcattgtgggggaagcttgctgccgagatactgatgcaaaactgg
gatattgctcttgaagaacttaatcgtttgaaagaaataatcgattccaagagcttctca
tcacctttgaaccaagttcagagtagaatatggctcatgcattggagcctcttcatcttt
ttcaaccatgacaatggaagaacacagatcatcgacctatttaatcaagacaagtatcta
aacgccattcaaaccagtgctccccatcttctaaggtacttagccactgcttttattgtc
aacaaaaggagaagacctcaattcaaagaatttatcaaggttatccagcaagatcaatgc
tcttacaaagatcccatcacggagtttttggcatgtgtttatgtcaactatgaatttgat
ggagcacagaagaagatgaaggagtgcgaagaagtgatactgaatgatcccttccttgga
aaaagagttgaagagggcaacttttctactgtcccattaaaagatgaatttcttgagaat
gctcgtctatttatcttcgagacatactgcagaattcatcagcgcattgatatgggggtg
ctttttgagaaactgaatttaaattacgaggagggtgagagatggattgtgaatctcatc
cgaaactctaaacttgatgcaaagattgattcaaagactggaaccgttattatggagcct
aatcaaccgaatgtttacgagcagctgatcgaccacactaaggcccttcaagggcggacc
tacaagctagtcggccagcttctcgagcacgcacaagcacagcctgcacgttaa
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