Gossypium hirsutum (upland cotton): 107935387
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Entry
107935387 CDS
T04793
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00500
Starch and sucrose metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107935387
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ghi01003
]
107935387
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
107935387
Glycosyltransferases [BR:
ghi01003
]
Polysaccharide
Storage polysaccharide
107935387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
IKKbetaNEMObind
Motif
Other DBs
NCBI-GeneID:
107935387
NCBI-ProteinID:
XP_016723470
UniProt:
A0A1U8M9N8
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All DBs
Position
D10:complement(1026293..1032603)
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AA seq
1153 aa
AA seq
DB search
MEASLQLQRFSSYGCFKIEPLLDSFPSVKTTQFTPWRSKCSVICLSHRVTASAADFSKRR
QRRLSKGSTPKGFTSKTRMSTQKRKQQKNNEQKEDSSIPKLSEFVEPNNREIELKVDEVE
NKEGKEDLSSIGKELDIRLSNHNVVNGNGNGMILGYVVGLEKKEISSENGTASIGLEKKE
IGSENGTVSTLRDVVSKGKHIDDTKTGEIVTVEVESVEVDEKTVQDKSLQLKLEMETNLR
KQEIEGLADENFLRGDKFFVYPQIIKPDGEIEVFFNRSLSNLKNEPDVLIMGSFNDWRWR
SFTVRLNKTHLKGDWWSCLIRVPKEAYKMDFVFFNGQNVYENNDKNDFCITVEGGIDVFA
FEDILVEEKRMELEKIAKEQAEKERQEEEQRRIGVEKAASEAERAQARIEIERRRGILQQ
LMKKAAQSFDNIWFIEPKEFKGAEKVRLYYNKSSSHLTHANELWIHGGHNNWNDGLTIAE
KLVKSEKEGGDWWYAEVVIPDGALVLDWVFANGPPKAATLYDNNNRQDFHAIVQKSIPEE
QFWVEEEHRIFEKLQKDRNLREEAIHAKAEKTTQMKGEMKERTLKRFLLSQKNVVYTEPL
DIHAGSMVTIFYNPANTVLNGKPEVWFRCSFNRWTHSIGPLPPQRMLPVDNGFHVKATVK
VPLDAYMMDFVFSEREDGGIFDNNGGTDYHIPVVGGIVKEPPMHVVHIAVEMAPIAKVGG
LGDIVTSLSRAVQDLNHNVNIVFPKYDCLKFEHVTDFHYQRCYSWGGTEIEVWFGKVEGL
SVYFLDPQNGFFSTGCVYGCGNDAQRFGFFCHAALEFLHQSGFHPDIIHCHDWSSAPVAW
LLKDHYMHYDGLSKSRVVFTIHNLEFGAHFIAKAMVYADKATTVSHTYSKEVAGNPAIAP
HLHKFHGILNGIDLDIWDPFNDTFIPVSYNSENVIEGKQAAKKALQQRLGLKNSDLPLVG
IISRLTHQKGIHLIKHAISRTLELNGQVVLLGSAPDPRIQNDFVNLANQLHSSHADRARL
CLNYDEPLSHLIYAGSDFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDND
KARAEAQGLESNGFNFDGADGSGVDYALNRAITAWYGARDWFNSLCKTVMEQDWSWNRPA
LEYIELYHATKKY
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgagtttacaattacagagattttccagttatggttgcttcaaaatcgaacca
ttattggattcctttccttctgttaaaactacacagtttaccccatggcgtagcaagtgc
tctgtcatttgtctttcacatagagttactgctagtgctgctgatttttccaagaggaga
caaagaaggttgtctaaaggttcaactccaaagggtttcacttcgaaaacacgaatgagt
actcagaagagaaaacaacaaaagaataatgaacagaaagaggattctagcattcccaag
ttgagtgagtttgtagagccaaataatagggaaattgaattgaaagtagatgaagttgaa
aataaagaaggaaaagaggatttatcatcaattggaaaagagttagatattcgcttaagc
aaccataatgttgtaaatggaaatggaaatggaatgattcttggatatgttgtcgggttg
gagaagaaagagataagttcggaaaatggcactgcgagtattgggttggagaagaaagaa
ataggctcggaaaatggcactgtgagtacattaagagatgttgtctctaaaggaaagcat
atagatgatacaaaaactggtgaaattgttactgtcgaggttgaaagtgttgaggttgat
gaaaaaactgttcaagataagtctctacagctgaagttggagatggaaactaatttgcgt
aagcaggaaattgaggggcttgcagatgaaaatttcttaagaggagacaagttttttgtt
tatcctcaaattataaagcccgatggagagatagaagtgttctttaataggagtttgtcc
aacttgaaaaatgaaccagatgttctaattatgggatctttcaatgactggcgatggaga
tcatttactgtaaggttgaataagacacatctcaaaggggattggtggtcttgtttgatt
cgtgtaccgaaggaagcttacaaaatggattttgtgttctttaatgggcagaatgtttat
gaaaataacgataaaaatgatttctgcataactgtggagggtggaatagatgtgtttgca
tttgaagatatcttggttgaggagaagcgaatggaattagagaaaattgcgaaagagcaa
gctgaaaaggaaagacaagaagaagagcaaagaagaataggagtagagaaggcagcaagt
gaagcagaaagagcacaagcaagaattgagattgaaaggaggcgaggaatattgcaacaa
ttgatgaaaaaggctgcacaatcatttgataatatttggttcatcgagcctaaggaattc
aaaggagcagaaaaggttaggttgtattataataaaagttcaagccatcttactcatgcc
aatgagctttggattcatggtggtcataataattggaacgatggattaacaattgctgaa
aagcttgtcaaatcagagaaagagggtggtgattggtggtatgcagaagttgttatacct
gatggagcccttgtgttggattgggtctttgccaatggaccacctaaggctgccactctc
tatgataacaataatcgtcaagacttccatgctattgtccagaaaagcattcctgaagag
cagttctgggttgaggaggaacaccgaatatttgagaagcttcaaaaggacaggaaccta
agagaggaggccattcatgcaaaggctgaaaaaacaacacaaatgaaaggtgaaatgaag
gaaagaactttgaagaggtttctgctttcccaaaagaatgtagtttataccgagccactt
gatattcacgcaggaagcatggtgactattttttataatcctgctaacactgtcctcaat
ggaaaaccagaagtatggtttagatgttcatttaatcgttggactcacagtataggtcca
ttgccacctcaaagaatgttgcctgtagataatggctttcatgtaaaagctactgtcaag
gttccattggatgcatatatgatggactttgtattctctgagagggaagatggtggaatt
tttgacaacaatggtggtacggattaccatatacctgttgttggaggaatcgtgaaagag
ccaccaatgcacgttgtgcatattgctgttgagatggcccctattgcaaaggttggaggc
cttggagatatcgttactagtctctcccgtgctgttcaagatctgaaccacaatgtgaat
atcgtttttccgaaatatgactgcttgaaatttgaacatgtgacagactttcattaccaa
agatgttattcttggggtggcactgaaattgaagtttggttcggtaaagtggaggggctt
tcagtttactttctcgatccacaaaatggattcttctcgacagggtgtgtttatggttgc
ggaaatgatgcacagcggtttggtttcttttgccatgctgctctcgaatttctacatcaa
agcggatttcaccctgatatcatccattgccacgattggtctagtgccccggttgcatgg
ttattgaaggaccattatatgcattatgatggtcttagcaaatctcgggttgtcttcacc
atacacaaccttgaatttggagcacacttcattgcaaaagctatggtatatgcagacaaa
gcaacaactgtatcacacacatattcgaaggaagttgctggaaatcctgcaatagctcct
catcttcacaagttccatggaatattaaacggaattgatttagatatttgggatcctttt
aacgatacgttcattcctgtatcttacaattcggaaaatgtcatcgaaggtaaacaagcc
gctaagaaagccttacaacaaaggcttggtttgaaaaactctgatcttcctttggttgga
attatttctcgtttaactcatcagaaaggaatccatctcatcaagcatgcaatttcacgc
accttggaactcaatggacaggttgtattgcttggctcggctccagatcctcgtatccaa
aatgattttgtgaatttagccaatcaactacattcatctcatgcagatcgtgctcgtctt
tgtttgaattatgatgagcctctttctcacttgatatatgctggttctgatttcattcta
gtcccatcaattttcgagccttgtggattgacacaacttacagcaatgcgatacggttcc
ataccagttgttcgtaaaacaggaggactatatgacactgtgtttgatgttgataacgat
aaagctagagcagaagcacaaggtcttgaatccaacggatttaatttcgatggagccgat
ggtagtggagttgattatgccctcaatagggcgatcacggcttggtacggtgctcgggat
tggttcaactcattgtgcaagacagtgatggagcaagactggtcttggaaccggcctgca
ctcgagtatatcgagctttaccatgcgactaagaaatactag
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