Gossypium hirsutum (upland cotton): 107935408
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Entry
107935408 CDS
T04793
Name
(RefSeq) abnormal spindle-like microcephaly-associated protein homolog isoform X1
KO
K16743
abnormal spindle-like microcephaly-associated protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107935408
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
107935408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IQ
CH
Arm
Motif
Other DBs
NCBI-GeneID:
107935408
NCBI-ProteinID:
XP_016723498
UniProt:
A0A1U8MD55
LinkDB
All DBs
Position
D10:complement(1128897..1141808)
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AA seq
1774 aa
AA seq
DB search
MEEEERFPPLSSSFVLKDISNFKTPKRIPKNPQFFTACNETPRSSSSFRYRSQPSLVPSS
SRSKAKAKLKAFQLERSQSACKEQLKKDRSLKSLAKSLTAWLNFLFQNPELCGCDLSING
CNESNVVRVDSAWRSPKRMRELWWRGEESENVVADVSSLKYSSLRSSLKEVCSFDELKQR
MQVYLSLVSCKEVFNIMTQAAKNIDGGRLKMKANCPIVTDVGVKEKATKILMSYNPIWLR
IGLYIIFGGDSLISPEGDFSSVKDISFLKMIIEKQFFSHTGLAKAYAYNKKVEGLYRPGY
YENLGNIILKRTLLLVLILDRAKSQTSLPLNYGIDGVDGGSPLLFTVSSGIKSSRQVLHN
FLSSDVMHGEGDLLAHLVIVGYKVSHQQSALVEFDFQVSDLFLDLQDGVRLCRVIQLLRH
DSSILMKIVVPSDTHKKNLANCGVALQYLREAGVMLCDEDGLKITRDDVADRDTELTLSL
LWNIFVRLQLPLLIDRTTIASEISKIRGFNMDKLNVINSTNLGMLLNWIQAICENYGLKV
DSFSSLVNRKAIWCLLDYYFRRELSCSNKDSHETRDEKSIMSTTDYTDAVHNFVLSQKLT
AILGKFPEVLQISDLLEHNGAVSDKSVVVLLTFLLSQLIVKKNVDQLNFHELLGCNCQTL
ERRRHSFTRRRSASSEAIVLKDRDLDITEDATKKFMIIQAWWRDMTERNYKNVVRPAAST
SSCFPAQKTSIDILREKAAIVIQSHLRRFIERHNFLKMTKAIGLIQAVARAWLTVKKNSE
LNKFSFAGVPEVPSELGRLVNFIGERHSFVNLRRSVLLIQHVARIWVAQRRDASYPILIK
AAIVIQKCFRGWVVRSLHMIENASRKCQQKGLSNSEIEAATGIQIAWKNFVSRSLHKHTF
AATKIQSHFRGWQLKRSFMKQKQAIITIQNNFRQFKCSSTFQQYKTARIENASFKYEEKS
LSIGETEAASRIQIAWKNFVCRYLHKQTYAATKIQSHYRAWHLKRSFIKQKQEIIIIQSN
FRRLKCWRAFQIAQKEFVCRSLQNQTFAATNIQSHFRGWQLRRSFVKQKQAIIAIQSKLR
QLKCSNAFQQYKMAARSAIIIQSCVRRWIAQRRALRCRYLTVAIQRHCRGWLARKDLLKR
RDAVIKIQRAIRCVICQKAFHLQKLAAIEIQRAIRGQISRNKLLGASSFCAASASSYGCN
MSKGFFQTFELKLVITSVLKLQRWWRSVLLLKLRTKSAIIIQSHSRGWIAKQKAYIEMHC
IVLIQRHCRGWLVRKEFSLKRDSVIKIQRAIRCLICQKAFHLQKLAAINIQRVIRGQLSR
SRLLGASSFHAATAGSYNCKMSKGFFQSFELKLVITSVLKLQRWWRCVMLLELRTKSAII
IQSHARGWIAKRETYRQKHCIVVIQRQSRGWLVRKDVLLRRDAVIKIQRAIRSLICQKAF
HLQKLAAIDIQMGQTARSRLLGATSAQAAGGGACNCNMSGGFVRRFELTLVIISVLKLQR
WWRGVLLLKSRARSVIIIQTHARGWIARQKAYRKRTCIVVVQSYWKGYVARKESREQLLN
LRLRMQKSAMNVDDSRRLINRLLSALSELLSMKSIRGILHNCETLDMATAHSLKCCEELV
AAGAITILLKLIRAASRSIPDQQVLKHALSTLRNLARYPHLTQLLIDTPASVETILWELH
RNKEEGYFIASQILKKICSNENGVITVHKFPALLKRLYNLVEELTRKAYNEKRNPRAVAV
RDNTDRRRLKEAVELLKLITNGYKSSKLPIAFAM
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagagcgttttcctccattatcttcttctttcgttcttaaagacatctcc
aatttcaaaaccccaaaacgcattcctaagaatcctcaattcttcaccgcttgtaatgaa
actccgaggtcatcctcgtcatttcgttaccgttctcagccttcccttgtcccttcctct
tcccgctccaaagccaaagccaagctcaaagccttccagttggagcgatctcagtccgct
tgcaaagagcaactcaagaaggaccgatcgctaaagtctttggctaaatctctcactgct
tggctcaatttcctctttcagaatccggagctttgcggctgtgatttgtcaattaatgga
tgcaatgagagtaatgttgtgcgagtggacagtgcctggagaagcccgaaaaggatgaga
gagttgtggtggagaggggaggaatctgaaaatgttgttgcggatgtttcaagtttgaag
tactcgagtttgaggtcttcgttgaaggaagtatgtagttttgatgaattgaagcagcgg
atgcaggtttatttgagtttggtgagctgcaaagaggttttcaatatcatgactcaagca
gctaagaatatagatggagggaggttaaagatgaaagcaaattgtcctatagttacagat
gttggagttaaggaaaaggctactaaaattctaatgtcctataacccaatttggcttcga
attgggttgtatattatttttggtggtgattccctgatatcacccgagggagattttagt
tctgtgaaagatatttcatttttgaagatgataatagaaaaacaattcttctcgcacact
ggacttgcaaaggcttatgcctataacaagaaggtggaaggtttgtacagaccaggatac
tacgagaatctggggaatattatattgaagagaactttattgcttgttcttatccttgac
cgagctaaatctcagaccagtcttcctcttaattacggtattgatggagtggatggaggt
tctcctcttctgttcacagtttcgtctggtataaaatcaagtcgtcaggtccttcataat
ttcttatcatctgatgttatgcatggagaaggtgatcttcttgcacatctagtgattgta
gggtataaagtttctcatcagcagtctgcccttgtggagtttgatttccaagtatcagat
ttattcttggatcttcaagatggtgtgcggctctgtagagttattcagcttctgcgacat
gattcctctatcctcatgaaaatagtagttccttcagacacccataaaaagaatttggcc
aattgtggtgttgccctgcaatatttgagagaggctggtgtcatgctatgtgatgaagat
ggattgaagattacaagagatgatgttgctgacagagatacggaactcaccctatccttg
ctctggaatatatttgttcgtttacagttgccacttctgattgacaggacaaccattgct
agtgaaatatccaaaatacgtggctttaatatggataagttgaatgtaattaattccacg
aatttgggaatgcttttaaactggatccaggcaatttgtgaaaattatggacttaaggtt
gacagcttttcttcactggttaatagaaaagccatatggtgcttgcttgattattacttc
cgcagagagctttcttgttctaacaaggactctcatgaaacaagagatgagaaatcaatc
atgtccactactgattacacagatgcagttcacaattttgtattatcacagaaactaaca
gcaatattgggaaagtttcctgaggttctgcaaataagtgacttacttgagcataatggt
gcagttagtgacaagagtgtggtagttttgctgactttccttctatcccagcttatcgtc
aagaaaaatgtggatcagttgaatttccatgaattgttgggttgcaattgccaaacccta
gagaggaggagacattcatttactcgaaggcggtcagcaagttctgaagcaattgtgcta
aaggacagagacttagatatcactgaagatgctactaaaaagtttatgatcattcaggct
tggtggcgagatatgacagaacgaaactacaaaaatgttgtaagacctgctgcttctact
tcatcttgctttccagctcagaagacaagcattgacattttaagagaaaaggccgcaata
gtcatacagtctcatttaaggcgattcatagagcgtcataattttcttaagatgacaaaa
gctattggcttaatccaagctgttgcgcgtgcatggttgactgtgaagaaaaattcagag
ctcaataaattcagttttgccggagttccggaagttccatctgaacttgggagacttgtc
aattttatcggtgagagacacagttttgttaatttaagaagatcagtgttactcatacag
catgttgcaaggatttgggtagctcaaagacgtgatgcatcctatccaatcctcatcaag
gctgccattgtaattcagaaatgttttcgtggttgggtggtaagatcacttcacatgatt
gagaatgcttctcgtaaatgccagcagaagggtctaagtaatagtgaaatagaagcagca
accgggattcagattgcatggaagaattttgttagcagatctctgcacaaacacactttt
gctgcaacaaaaattcagagtcatttccgtggctggcagttaaaaaggagttttatgaag
cagaagcaagcaataatcacaattcaaaataattttcgacagttcaaatgttcgagtact
tttcaacagtacaaaactgctcgtattgagaatgcttcgttcaagtacgaagagaagagt
ctaagtattggtgaaacagaagcagcaagcaggattcagattgcatggaagaactttgtt
tgcagatatctacataaacagacttatgctgcaactaaaattcaaagccattaccgagct
tggcatttgaagagaagttttataaagcagaagcaagaaataataataattcaaagtaat
tttcgacggctgaagtgttggcgggcctttcagattgctcagaaggaatttgtctgtaga
tctcttcaaaatcagacatttgctgcaacaaatattcaaagtcatttccgtggttggcag
ttaagaaggagttttgtcaagcagaagcaagcaataatagcaattcaaagcaaattacga
cagctaaaatgttcaaatgcttttcagcaatataagatggctgccagatcagcaatcatc
attcaatcttgtgttcgtagatggatagctcagagaagagctttgagatgtaggtatctt
actgttgcaatccaaagacattgccgcggttggcttgcaaggaaggatcttttgaagcga
agggatgctgtaataaagatccaaagagcaatacggtgtgtaatatgtcagaaggcgttt
catcttcagaaattggcagctattgagattcaaagggctatcagagggcaaatttctcga
aataagcttttaggagcatcttccttttgtgcggctagtgcttccagttacggttgtaat
atgtcaaagggcttcttccagacttttgaactaaaattagtgattacttcagttttgaaa
ctgcaaaggtggtggagaagtgttctgttacttaaattaagaacgaaatcagcaatcatt
attcagagtcattcacggggatggattgctaagcaaaaagcatatatagagatgcattgt
attgttttaatacaaagacattgtcgtggttggctcgtaaggaaggagttttcgttgaaa
agggattctgtaataaagatccaaagagcaatacggtgcctaatatgtcagaaggcattt
catttacagaaattggcagctattaatattcaaagggttatcaggggtcaactttctcga
agtaggcttttaggagcatcttcctttcatgcagctactgctggcagttacaattgtaag
atgtcaaaaggcttcttccagagttttgaactaaaattagtgattacttcagttctgaaa
ctgcaaaggtggtggagatgtgttatgttacttgaattaagaacaaaatcagcaataatt
attcagagtcatgcacggggatggattgctaagcgagaaacttacagacagaagcattgt
attgttgtaatacaaagacagagccgtggttggcttgtaaggaaggatgttttgttgaga
agggatgctgtaataaagatccaaagagcaataaggagcctaatatgtcagaaggccttt
catttacagaaactggcagctatagatattcaaatgggccaaactgctcgaagtaggctt
ttaggggcaacttctgctcaggcagctggtggtggtgcctgcaattgtaacatgtcagga
ggcttcgtccggcgttttgaattaacattagtgattatttcagttctgaaactgcaaagg
tggtggagaggtgttctgttacttaaatcaagagcaaggtcagttatcattatccagact
cacgcacgggggtggattgctaggcaaaaagcgtatagaaagaggacttgtattgttgta
gtacaatcatattggaaaggttatgttgctcggaaagaatcaagagagcagctattgaat
ttgcgcttgagaatgcaaaagtctgctatgaatgttgatgatagcagacgtcttattaac
cgccttttgtcagcactttcggaactactgagcatgaaaagcatccgtggcattcttcac
aactgtgagaccttagatatggctacagctcattctctgaaatgctgcgaagaacttgtg
gctgccggtgcaatcaccattctactaaagctgattcgtgccgccagtcgtagcataccc
gaccaacaggttctaaagcatgcactctcaacacttcgaaacctcgcacgttatccgcat
ttgacacaattgttaatcgacactcctgcatctgtagagacaatcttatgggagttgcac
aggaacaaggaagaaggatattttattgcttcacaaatcctgaagaagatatgttcaaat
gagaatggtgtgataactgtacacaagtttcctgctcttttgaagagactatacaatctt
gttgaagaactcacaaggaaagcatacaatgaaaaaaggaatccccgtgctgttgctgta
agagacaacacagatagaagaagactgaaggaggccgtggaacttcttaaactaataaca
aatggttataaatccagcaaattgccaatcgcttttgcgatgtga
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integrated database retrieval system
