Gossypium hirsutum (upland cotton): 107935547
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Entry
107935547 CDS
T04793
Name
(RefSeq) rhomboid-like protein 20 isoform X1
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107935547
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
107935547
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Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
UBA_RAD5A
RuvA_C
DER1
Motif
Other DBs
NCBI-GeneID:
107935547
NCBI-ProteinID:
XP_016723663
UniProt:
A0A1U8MDL4
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Position
D13:complement(138344..150767)
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AA seq
293 aa
AA seq
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MNGGPSGFNNAPVTKTFVIASALFTVFFGIQGRSFKLGLSYQDIFTKLSIWKLITSVFAF
SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVMASFLFEVMAVAILKDPTSNLLTS
GPYGLIFASFVPFFFDIPVSTWFRIFGVRFSNKSFIYLAGLQLLLSSWKRSLLPGICGIL
AGSLYRLNVFRIRKAKFPEFITSFFSRLSWPSIGNPPTTPARNLAGNVPSYTTRQVERTY
PSAVASSAIEPSEDAVATLVSMGFDQNSARQALVHARNDINAATNILLEAQSH
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggcccctctggtttcaataatgctccggtgaccaaaacctttgtaattgca
tctgccctcttcaccgtattctttgggatccaaggtcgttctttcaagctcggtttgtcc
tatcaggatattttcacaaaacttagcatatggaagttaatcacatcagtctttgccttt
tcatctacaccagaactgatgtttggactttatctactgtactacttcagggtctttgag
cgacaaattggttccaataagtactctgtttttattttgttctcagtaatggcttcattc
ctctttgaggttatggcagtagctatccttaaagatcccacatctaacctgctcacttct
ggaccttatggcctcatatttgcttcattcgtaccctttttttttgacatcccggtttca
acatggtttcgtatttttggtgttcgcttctccaataagtctttcatctatctagctggt
cttcagctgcttctatcatcttggaaaagatctctcttgccagggatatgtggcatcctt
gctggttccttatatcgtctaaatgtcttccgcatccgaaaggctaagttccctgagttt
attacatcattcttttcgcgtctttcttggccttctattgggaatccacctacaacaccg
gctaggaatcttgcaggaaatgtaccttcctacacaactcgccaagtggagagaacctat
ccatccgcagttgcatcttcagccatagagccatcggaggatgctgttgctacgctggtg
tctatgggctttgatcagaactcagctaggcaggcacttgtgcatgctagaaatgacatc
aatgctgccacaaacattcttcttgaagcacagtcccactaa
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