Gossypium hirsutum (upland cotton): 107935609
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Entry
107935609 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: SUPPRESSOR OF ABI3-5
KO
K13094
RNA-binding protein 5/10
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107935609
Spliceosome [BR:
ghi03041
]
Complex A
Other components
Complex A specific factors
107935609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
OCRE
G-patch
G-patch_2
Zn_ribbon_RanBP
DUF3008
Motif
Other DBs
NCBI-GeneID:
107935609
NCBI-ProteinID:
XP_016723748
UniProt:
A0A1U8MA91
LinkDB
All DBs
Position
A12:complement(10796224..10807702)
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AA seq
1057 aa
AA seq
DB search
MDPGRYPVQQGHGWDNNSALEGFPAALDHNYRVCGSYDERRYLDERYSRDNVYPRSNYHR
DFLERDNQPPPPAASAGIWSQSRRTTYEEEYPHNRDSRRHQKPYADSYSDMDTFRDHEIT
SFQDFDKFRDGYRGVDSFRDHEFDRPSRFGGRERDDNSYDDYDYRPRVSHQSRDNSRERD
YEYGRHSYDSDYERGSRRDGNWRRRDRDRLSRERDQSPHRRHERSRSRSHGRDDRPRSRS
PRSRSHGRSHREDSYDDGRNDKTEKRRDREEKYQREHYSVAPSATVVVKGLSQKTTEEDL
YQILAEWGPLRHVRVIKERHSGISRGFAFIDFPSVGAASTMMERIGDDGLVVDGRKLFFE
YSSKPTGGTGGPFGNDNALKSGHSVHRGITVPSDWMCTICGCVNFARRTSCFQCNEPRTD
DAPAADISLSHSTSLGKKGTDSGPTHVLVVRGLDENADEEMLRYEFSKHAPIKDLRLVRD
KFTHVSRGFAFVHFHSVADATKALEATNGTTLEKNGQILRVAYAKSILGPGSGTSGASQS
SSLAAAAIEAAAFSQQYDAVGWTPKEYNPDDKQSTSWQEQVVGSVPVQQDGSGLHSGFVW
DEASGYYFDAASGFYYDGNTGLYYDGNSGIWYSYDNQSQQYIPCGDQNDNKTPGKQSEPS
KGTDGRKVVISAPAATVTSVEKAASLPDAVQAAATAALAAEKKEKEKAKEIKLASKSSIL
ANKKKMNNVLTMWKQRSHEGQATRLTLDENHLSTLSEDRPLQSGQHAKTKVKFDVTGLKE
SSISSSGVNTTAQAALTXGLESPVKARPVSNSSGGTLMGVIRGSARGVVKSDTPYSGTSA
GISTSAVGGAEVSSTNSDMPTVMTPFRTDASALGSYTPSTVSASGKRRFSETPVTSTTSK
EQSQTAYRDRAAERRNLYGSSSSTGDDLPDPELRNSNRDMAFKKFSSDPMPFPPGVGGGR
GVVSDDVQSFEVITAEKAIDEKNVGNQMLRNMGWHEGLGLGKDGSGMKEPVQTQAMDGRA
GLGSQTKKLDPSLEVQAGDSYKTVIHKKALARFREMS
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggaccctggtcgctaccctgttcaacaaggacatggatgggataataacagcgctctt
gagggttttcctgctgctcttgaccacaattaccgggtctgtggttcatatgatgagagg
agatatctagatgaaagatactcgagggataatgtgtatccaagaagtaactaccacaga
gattttctggagagggataaccaaccccctcctcctgctgcttctgctggtatctggtct
caatcaagaaggacaacttatgaggaagaatatccccacaatcgggattctaggcgtcat
cagaagccttatgctgattcttatagtgacatggatacttttcgtgatcatgagatcact
tcatttcaagattttgataagtttcgggatggctatcggggtgttgacagctttcgtgat
catgaatttgacaggccctctaggtttgggggacgagaacgagatgacaactcatatgat
gattatgactataggccacgtgtttcccatcagagcagggacaacagccgtgagagggat
tatgaatatggccgacatagttatgattctgattatgaaagaggtagtcgaagagatggc
aattggaggaggcgcgatcgagatcgcctgagtagagagagagatcagagtccacataga
aggcatgagagatctcgatcacgatcccatggacgcgatgatcgtcctagatcaagatca
cctcgaagtcgaagccatggacgaagtcatcgtgaggacagctatgatgatggtcggaat
gataaaactgagaagcgaagggatcgtgaagagaaatatcagcgggaacattattctgtg
gcaccatctgctactgttgttgtaaagggtctctcgcaaaaaacaactgaagaagatcta
taccagattcttgctgaatgggggcctcttcgccatgtccgagtgatcaaagagcgacat
tctggaatttctcgtggatttgcttttatcgattttccctctgtgggggcagcaagcact
atgatggagaggattggtgatgatggtcttgttgttgatggtcggaagcttttttttgag
tacagtagtaagccaactgggggcactggtggaccttttggtaatgataatgctttgaag
tcaggccattcagttcataggggcatcactgtgccttctgattggatgtgcaccatatgt
ggatgtgtcaactttgcacggcgaacttcatgctttcaatgtaatgagccacgtacagat
gatgctccagcagctgacatatctttatcacattcaacatccttaggaaagaaaggaact
gattcaggtcctactcatgtactggttgttcgtgggttggatgaaaatgctgatgaggaa
atgctccgttatgagttctctaaacatgcaccaattaaggatcttcgccttgttagagac
aagttcacccatgtgtcaagggggtttgcttttgttcatttccattcggttgctgatgcc
acaaaagctctagaagctacaaatggaacaacgcttgagaagaacgggcaaatcttaaga
gtggcatatgcaaagagcatccttgggccaggatcagggacatcaggagcttcacagtca
agtagccttgcagctgctgcgattgaggcagcagcgttttctcaacagtacgatgctgtt
ggatggacaccaaaggaatataatccagatgacaaacagtctactagctggcaggagcaa
gttgttggttcagttccagttcaacaggatggttcggggttgcattctggttttgtgtgg
gatgaagcttctggttactactttgatgctgcttctgggttttactatgatggaaataca
ggtctttactatgatggtaacagtgggatctggtattcgtatgataaccagtctcagcag
tacataccttgcggtgatcagaatgacaacaaaacacctggtaagcagtctgagccttcc
aaaggaactgatggtaggaaggtagtaatatctgcgccggctgctactgtcacttcagtt
gagaaggcagcctctttacctgatgcagttcaagcagctgcaacagcagcactagctgcg
gagaagaaagaaaaggagaaagcaaaagagataaaacttgcttcgaaaagcagtatcctg
gctaataagaagaaaatgaataatgtgttgacaatgtggaaacagaggagtcatgaaggg
caggccacgcgtttaactcttgatgaaaatcacttgtctactttatctgaggatagacct
ctgcaatctggacaacatgcaaagaccaaagttaaatttgatgtgacgggcctgaaggag
agtagtatatcaagttctggagtcaatacaactgcccaagctgcattgactnggggtttg
gagtctccagtcaaggcaaggcctgtaagcaacagctcaggggggactttaatgggagta
ataagaggctcggcaagaggcgtggtaaagtctgatactccatactctggaacatctgct
ggaatttccacttcagctgtcggaggtgctgaagtttcatcaaccaattcagatatgccc
acagttatgactccctttaggactgatgcttctgcattgggttcttatacaccttcaact
gtctctgcaagtggtaagagaagattttctgaaacaccagtgacttctactaccagcaag
gagcaatctcaaactgcttacagagaccgtgcggccgagaggaggaacttgtatggttca
tcatcttccacaggagatgatctgcctgaccctgagctcaggaattcgaatcgagatatg
gcattcaaaaaattctcctcagatccaatgcctttcccacctggtgttggtggtggacgg
ggggttgtgtcagatgatgttcaaagctttgaggtgatcacagcagagaaagcaattgat
gagaaaaatgtgggcaaccaaatgctccgcaatatgggttggcatgaaggattgggattg
gggaaggatggaagtggaatgaaagaaccagtacaaacgcaggcgatggatggtagagca
ggactcggaagtcagacgaagaagttggaccctagccttgaggtgcaagccggggatagt
tacaaaactgtgattcataagaaagcacttgctaggtttcgtgaaatgtcttag
DBGET
integrated database retrieval system
