KEGG   Gossypium hirsutum (upland cotton): 107935704
Entry
107935704         CDS       T04793                                 
Name
(RefSeq) proliferating cell nuclear antigen
  KO
K04802  proliferating cell nuclear antigen
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03030  DNA replication
ghi03410  Base excision repair
ghi03420  Nucleotide excision repair
ghi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107935704
   03410 Base excision repair
    107935704
   03420 Nucleotide excision repair
    107935704
   03430 Mismatch repair
    107935704
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ghi03032]
    107935704
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107935704
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    107935704
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     107935704
   MMR (mismatch excision repair)
    Other MMR factors
     107935704
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    107935704
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad9 Ribosomal_L14
Other DBs
NCBI-GeneID: 107935704
NCBI-ProteinID: XP_016723840
UniProt: A0A1U8MAQ1
LinkDB
Position
D13:64273490..64275422
AA seq 266 aa
MLELRLVQGSLLKKVLEAIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY
RCDRNLSMGMNLNNMSKMMKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD
IDSEHLGIPEAEYQSIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANI
VLRQNTTVDKPEEATIIEMNEPVSLTFALRYMNSFTKATPLSSTVTISLSSELPVVVEYK
IAEMGHIRFYLAPKIEEDEDETNPQG
NT seq 801 nt   +upstreamnt  +downstreamnt
atgctagagcttaggctagttcaaggttcgcttctgaagaaagtattggaagcgattaag
gacttggtcaacgatgcgaactttgactgttcggcgaccggattctcattgcaagccatg
gattcaagccacgtggctttggtggctctgctgctcagatcggaaggtttcgagcactat
cgttgcgataggaacctttccatggggatgaatctcaataacatgtctaagatgatgaaa
tgtgctggtaatgatgatatcatcacaatcaaggctgatgatggcagtgatactgttact
ttcatgttcgaaagtcccacacaagacaagatatcggattttgagatgaagctgatggat
attgatagtgaacaccttgggattccagaggcagagtatcaatctattgtgaggatgcct
tcagctgagtttgctaggatttgtaaagatcttgctagcattggtgatactgttgttatc
tctgtaaccaaggaaggggtgaaattttccacaagaggtgatatcggaactgctaatatc
gttctcaggcaaaataccacggtagacaaacctgaagaagcgactatcatagagatgaac
gagcccgtttcattgacatttgcattgaggtacatgaattcatttacaaaagcaactcca
ttgtcgagtacggtgacgattagcttatcttcggaattgccagttgtggttgagtacaag
atagctgaaatgggtcatattaggttttacttggcacccaagattgaagaggatgaagat
gagactaacccacaaggttaa

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