KEGG   Gossypium hirsutum (upland cotton): 107935807
Entry
107935807         CDS       T04793                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 1
  KO
K12195  charged multivesicular body protein 6
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03250  Viral life cycle - HIV-1
ghi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107935807
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107935807
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107935807
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107935807
Membrane trafficking [BR:ghi04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    107935807
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107935807
  Exosomal proteins of other body fluids (saliva and urine)
   107935807
SSDB
Motif
Pfam: Snf7 TINF2_N IL34
Other DBs
NCBI-GeneID: 107935807
NCBI-ProteinID: XP_016723917
UniProt: A0A1U8MAQ8
LinkDB
Position
D04:5328719..5334502
AA seq 219 aa
MGNLLAKKPKITEVDRAILSLKTQRRKLGQYQQQLEAVIEAEKQAARDLIREKRKDRALL
ALKKKKAQEELLKQVDTWLINVEQQLADIELASKQKAVFDSLKAGNNAIKAIQSEINIDD
VQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFENLETQMAVQDMPEVPTKAGSE
EEKLDLPDVPTKKPVASDAATDDAEISTKRRVMEEPLPA
NT seq 660 nt   +upstreamnt  +downstreamnt
atggggaatttattggcaaagaaacccaagatcaccgaagtcgatcgagcaattctctcg
ctcaagactcagagacgcaagcttggtcaataccagcaacagctggaggctgtaatagaa
gcagaaaagcaagctgctagagacttgattcgtgaaaagaggaaggatagagctttgtta
gctttgaagaagaagaaagctcaagaagaactattgaagcaagttgatacctggcttatt
aatgttgagcaacaattggcagatattgaactagcaagcaagcaaaaagcagtttttgat
agtttgaaagcaggtaacaatgcaattaaggcaatacaaagtgagatcaacattgatgat
gtgcagaagttaatggatgacaccgaagaggctaaggcttatcaagatgaaattaatgcg
atcttgggggagaagttatcagcagaagatgaagaggagattttggcagaatttgagaac
ttggaaactcagatggccgttcaagatatgccagaagtgcctaccaaagcaggatctgaa
gaagaaaagttggatcttcctgatgtgccaaccaagaaaccagttgcttccgatgcagct
acagatgatgctgaaatttccacaaaaagaagagttatggaggaacccctacctgcatga

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