KEGG   Gossypium hirsutum (upland cotton): 107935943
Entry
107935943         CDS       T04793                                 
Name
(RefSeq) RING-H2 finger protein ATL74-like
  KO
K19040  E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107935943
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107935943
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    107935943
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-ANAPC11 Prok-RING_1 FANCL_C zf-RING_4 zf-C3HC4_3 zf-RING-like zf_RING_Vps8_fungal Neurokinin_B zf-C3HC4_4 SLX1_C zf-RING_16 Zf_2nd_IFT121 zf-Nse RINGv
Other DBs
NCBI-GeneID: 107935943
NCBI-ProteinID: XP_016724059
UniProt: A0A1U8MES6
LinkDB
Position
A02:complement(237962..238865)
AA seq 171 aa
MSTLAPSNEDQAYDPFLTPMENFFSHAIMKLAVLLFAMILFVQLNSLIHGRCRENPERAA
ATQLATVGLNKRDLKRIPVAVYRTGGTSFTATDCPICLGEFLDGEKVRVLPKCNHGFHVK
CIDKWLMSKSSCPNCRHSLLEHETVNRDVIAGPDRLPSDSGDVLIVVQEGS
NT seq 516 nt   +upstreamnt  +downstreamnt
atgagtacattggcaccatccaatgaggatcaagcctatgatcctttccttaccccgatg
gagaatttcttctcccatgcgattatgaaattggccgtacttctttttgcaatgatatta
tttgttcagttgaattcgctcatccatggtcgctgtagggagaatccggaacgagcggcg
gcgactcagttggcgacggtggggttgaataaacgggacttgaaacgaatcccggtggcc
gtttacaggactggcggcacaagctttacggccaccgactgtcccatttgtcttggagag
ttcttagatggggaaaaggtacgagtgttaccaaaatgcaaccatggattccatgtgaag
tgtatagacaaatggttaatgtcgaagtcatcgtgcccgaattgtcgacattcattgctc
gaacatgagacggtgaaccgggatgttatcgccggtcccgaccggctaccgtcggatagt
ggcgatgttcttatagttgttcaagagggaagctag

DBGET integrated database retrieval system