Gossypium hirsutum (upland cotton): 107935951
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Entry
107935951 CDS
T04793
Name
(RefSeq) transcription elongation factor TFIIS-like isoform X1
KO
K03145
transcription elongation factor S-II
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107935951
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107935951
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
LEDGF
Zn_ribbon_Elf1
Baculo_LEF5_C
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
107935951
NCBI-ProteinID:
XP_040943401
UniProt:
A0ABM2ZM66
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Position
A02:complement(179812..182629)
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AA seq
360 aa
AA seq
DB search
MERELMKLFDAARKAADLAAAASDAVSSKGPEVSRCVDALNQLKTFPVTHDILVSTQLVR
KLRPLTKHPTEKIHRMASDLLELWRKIVIEEPSKSEKNGTASAVKVEKIQRLSALKAEKI
SSTETIKVKEAPNGGSTKHVKVEKKEADGNTATAEKINRGETGKIKKIYIDGKTKAKSAP
KLITLVKFNDPLRDKFRKILVEALSKVPSETDEDMLDQVNACDLIWVAVTVESVMFRKMG
KSNGTSNIKYRSIMFNMKDPKNPDFRRKVLVGEVNPERLITMTPEEMASEQRQREDKEIK
EKALSRDPFKCGRCGKRDTSYYQMQTRSADEPRTTYVTCVNCNNQWEFCERNPDYPSLKM
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggagagagagctcatgaaattgtttgacgcagccaggaaagccgcggatttggctgcc
gccgcctccgatgccgtttcctccaagggtcccgaagtttctagatgcgtcgacgccttg
aaccagctcaagactttccctgtcactcacgacattcttgtttctactcagctcgtgaga
aagcttcgacctctcacaaagcatcctacggagaagattcatagaatggcttcggatttg
ctggagttatggagaaaaattgttattgaagagccttccaagagtgagaaaaatggcact
gctagtgctgtcaaggttgagaaaattcagaggttgagtgctctgaaggctgaaaagatc
tccagtacggaaaccataaaggttaaggaagcgcctaacggtggttcaacgaagcacgtc
aaagttgagaaaaaggaagcggatggaaatacagcaacggctgagaagataaatcgcgga
gagactggtaagattaagaagatttatatcgacgggaaaacaaaggcgaagagtgctcca
aagttgattacattggtcaaatttaatgatcctttgcgtgataaatttcggaagattcta
gtggaggccttgtctaaagttcccagtgagactgatgaagacatgttggatcaagtgaat
gcttgtgatctcatctgggttgcggtaactgtggaatctgtgatgttcaggaagatgggt
aaatcaaatggcaccagcaatattaaatatagatcgataatgttcaacatgaaggatccg
aaaaatccagacttcaggaggaaagttcttgtaggagaagtgaatccggaaaggcttatc
actatgaccccagaagaaatggccagcgagcaaaggcaacgcgaggataaagaaataaaa
gaaaaagctctatctcgcgatccatttaagtgcggtcgttgtggtaaacgggacaccagt
tactatcaaatgcagactaggagtgcagatgaacctaggacaacatacgtaacgtgtgta
aactgcaacaatcaatgggaattctgtgagaggaatccggattatccgtcattgaagatg
tag
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integrated database retrieval system
