Gossypium hirsutum (upland cotton): 107935978
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Entry
107935978 CDS
T04793
Name
(RefSeq) regulatory-associated protein of TOR 1-like isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107935978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107935978
Membrane trafficking [BR:
ghi04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
107935978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
HEAT
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
PEP5_VPS11_N
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
WD40_RFWD3
PROPPIN
Motif
Other DBs
NCBI-GeneID:
107935978
NCBI-ProteinID:
XP_040943508
LinkDB
All DBs
Position
A02:407769..419584
Genome browser
AA seq
1355 aa
AA seq
DB search
MALGDLMTSRFSQLSLAVSNHVIDGNVSSGGYHEDDVAYADLMSQRRDLDAVSTSSYANA
VTSTATVPTIMAYLPQTVVLCELRHAAFEASTPTGPSDSGLVSKWRPKDRMKTGCVALVL
CLNISVDPPDVIKISPCARMECWTDPFSMAPQKALETIGKNLRDQYERWQPKARSKVELD
PTVDEVKKLCNTCRRYAKSERVLFHYNGHGVPKPTANGEIWLFNKSYTQYIPLPISDLDS
WLKTPSIYVFDCSAAGMVVNAFIELLDCGTSNYPGSSRDCVLLAACEAHETLPQSSEFPA
DVFTSCLTTPIKMALRWFCTRSLLHESLDSSLIDKIPGRQNDRKTLLGELNWIFTAVTDT
IAWNVLPHDLFRRLFRQDLLVASLFRNFLLAERIMRSANCSPISYPMLPPTHQHHMWDAW
DMAAEICLSQLPSLVEDPNAEFQPSSFFTEQLIAFEVWLDHGSEHKKPPEQLPIVLQVLL
SQCHRFRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTTTPELRQILVFIWTKILAL
DKSCQVDLVKDGGHVYFIRFLNSAEAYPEQRAMAAFVLAVIVDGHRRGQEACIEAGLIQV
CLKQLHGFTQNEAQTEPLLLQWLCLCLGKLWEDFTEAQTIGLQADVPGICAPLLSEPQPE
VRASAVYALATLLDVGFDSFRDGIGGDEECDDVEKNRAEMIIIKSLLNVVSDGSPLVRAE
VAVALAHFAFGHKQHLKSIAAAYWKPQPNSLLNSLPSLANLKGTGSGNIVSSQIGPLTAM
VRDGRVSTSSPLATAGIMHGSPLSDDSSQLSDSGILNDGVSNGEVNHSRPKPLDNAMYSQ
CVLAMFTLARDPSPRVASLGRLVLSIIGIEQVTKSVKPAGNSAWPSDPANSSSTPSISGL
ARSSSWLDINGGHMPLTFRTPPVSPPRQNYLAGIRRVCSLDFRPHLMNSPDSGLADPLLG
STSGSERSLLPQSTIYNFSCGHFSKSLLTASDDSEELLAKREEQERFALEHIAKCQHSSV
SKLNNNSQIASWDTKFETGTRTALLQPFSPIVIAADENERIRVWNYEEATLLNGFDNHDF
PEKGISKLCLLNELDDSLLLVASSDGNIRIWKDYTLRGKQKHVTAFSSIQGHKPGVRSLN
AVVDWQQQSGYLYASGEISSIMLWDLDKEQLVNSIPSSSDCSVSALASSQVHAGQFAAGF
VDGSVRLYDIRTPDMLVRTTRPHTQQVARVVGIGFQPGLDQGKIVSASQAGDIQFLDIRS
QRDTDLTIDAHRGSLTALAVHRHAPIIASGSAKQLIKVFSLKGEQLGTIRYQHTFMAQKI
GSVSCLTFHPYQVLLAAGAADACVSIYADDNSHTR
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggtgatctgatgacgtcacgattttcgcaattgtcgttggcggtatcgaat
catgtcatcgacggtaacgtcagcagtggcggctaccatgaggacgatgttgcttatgct
gacttgatgtctcagaggagggatttagatgctgtatcaactagcagttacgccaatgcc
gttacttccacggccactgtgcctacgatcatggcttacttgccgcaaactgttgtttta
tgcgagcttcggcatgctgcctttgaagcttccacgccaactggaccctctgatagtggc
cttgtttccaaatggcgccccaaggaccgaatgaagacaggatgtgtggccctagtttta
tgtttaaatatcagtgttgatccacctgatgtaataaaaatatctccttgcgcaagaatg
gagtgctggactgaccctttttctatggcaccacaaaaagctctggaaactattgggaaa
aacttgagagatcaatatgagaggtggcagcccaaggctcgcagtaaggttgaacttgat
cctacagtggatgaagtgaagaaactttgtaatacatgtcgcagatatgccaagtcagag
agagttttatttcattacaatggacatggtgttccaaagccaactgcaaatggtgaaatc
tggctgtttaataagagttatacacagtatattcccttgcctatcagcgatcttgattct
tggttaaaaacaccttctatatatgtttttgattgctctgctgcaggaatggttgttaat
gccttcattgagcttcttgactgtggcacttctaactaccctggatcttcaagagactgc
gttcttctggctgcatgtgaagcacatgagactcttcctcaaagttctgaatttcctgct
gatgtgtttacttcttgtcttactacacctatcaaaatggcattgagatggttttgtaca
cgttcattgcttcacgagtctcttgactcttcacttattgataaaattcctggccgtcaa
aatgaccgtaaaacacttctaggggaattgaattggatatttactgcagtgactgacaca
attgcttggaatgttctccctcatgaccttttccgaaggttgtttagacaggatttacta
gttgctagtttgttcagaaattttttgcttgccgagaggattatgcgctctgcaaattgt
tctccaatttcttacccaatgttgccaccaacccatcagcaccatatgtgggatgcatgg
gacatggctgctgaaatttgcctttctcagcttccatcattggttgaggatcctaatgca
gagttccagccaagttcatttttcactgagcagctgatagcctttgaggtatggcttgac
catggatctgagcataaaaagccaccagagcaattgcctattgtgcttcaggttttgctt
agtcaatgtcatcgattccgtgctctagttcttcttggaagattccttgatatgggacca
tgggctgtagatctggccctttctgttggaatatttccttatgttctgaagctgttgcaa
acaaccactccagaactgcgtcaaatccttgtcttcatttggacaaaaattttggcactt
gataagtcatgtcaggttgatcttgtaaaggatggtggtcatgtttatttcattaggttt
cttaatagtgcagaggcatatcctgaacagcgtgcaatggctgcatttgttctggctgtc
attgtggatggtcatagacgaggccaggaagcctgtattgaagcagggttaatccaggtg
tgcttgaagcagcttcatggtttcacgcaaaatgaggcacaaactgaacccttattactt
cagtggctttgcctttgtcttggaaagctgtgggaggattttactgaggctcagacaatt
ggtctgcaggcagatgtgcctggaatatgtgctcctctactctctgagcctcagccagag
gttagagcttcagcggtttatgcattagctaccttgcttgatgttgggtttgactcgttt
agagatggtattggaggggatgaagaatgtgatgatgttgaaaagaatagagctgagatg
attataattaaaagccttttgaatgtcgtctctgatggaagccctcttgtccgggcagaa
gttgctgtagctctggcacactttgcctttggacataagcagcacctcaagtcaattgct
gctgcatattggaaacctcagcctaattccctgttgaattcattgccttcacttgctaat
ttaaagggcacaggaagtggaaatatagtttcttctcagattggtcctttaacagccatg
gttcgggatggaagggtatccaccagcagtcctcttgctactgctggaatcatgcatgga
tctccattatccgatgattcatctcaactttctgattctggaatactgaatgatggtgtc
agtaatggggaagttaatcattcaagaccaaaacctttggacaatgcaatgtattcacag
tgtgtactggccatgtttactttagctagggatccatctccacgtgtagcaagtctagga
cggctggttctttccattattggaattgaacaagtaacaaaatctgtgaagcctgctggt
aatagtgcctggcctagtgatcctgcaaattcctcatcaacccctagtatttctggatta
gctcgttcttcttcctggttggacattaatggaggtcatatgcctttaacatttagaact
cctcctgttagccctcctcgacaaaattacttggcaggaattcgtagggtttgctcttta
gacttcaggcctcacctgatgaattctccggactcaggattggctgacccacttctaggc
tctacttctggatcagagcgcagtttacttcctcagtcaacaatatataattttagttgt
ggccacttctcgaagtctctgcttactgcatcagatgacagtgaagaactactggccaaa
agagaagagcaggagagatttgcactggagcatattgctaagtgccagcactcatctgtt
agcaaacttaacaataatagtcaaattgctagctgggatacaaaattcgagacaggtaca
agaactgccttgctgcaacctttctctcctattgtgattgcggcagatgagaatgaacgg
atcagggtatggaattatgaggaagccaccctcctcaatggttttgataatcatgatttt
ccggaaaagggaatatctaaactttgtcttttgaatgagcttgatgacagcttgttgctt
gttgcttcaagtgatggaaatatacggatttggaaagattatacactgagggggaaacaa
aaacacgttaccgcattttcttctatccaaggtcacaaacctggtgtgcggagtttgaat
gctgttgtggactggcaacagcagtctggatatctctatgcatctggagagatatcatcc
atcatgctttgggacttggataaggagcaacttgttaattcaataccatcatcctcagat
tgtagtgtctcggcattggcttcttctcaagtccatgctggtcaatttgcagctggtttt
gtggatggttctgttagactatatgacatccggacacccgacatgctggttcgcacaacc
aggccgcatactcaacaagtagcaagagttgtgggtatcggctttcaacccggacttgat
caaggaaagattgttagtgcatcccaggctggtgatattcagttcctcgatattagaagt
caaagagatacggaccttacaatcgatgctcaccgaggatcacttacagctttagctgtt
cacagacatgccccgataattgccagtggttcagcaaaacagctaatcaaagttttcagt
ctaaaaggcgaacaactcggcaccattagataccaacataccttcatggcccagaagatt
ggttctgtaagctgccttaccttccatccctaccaagtgttactcgctgccggtgccgct
gatgcctgcgtttcaatctatgccgatgacaactctcatacaagataa
DBGET
integrated database retrieval system
