Gossypium hirsutum (upland cotton): 107936060
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Entry
107936060 CDS
T04793
Name
(RefSeq) oligoribonuclease-like isoform X1
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107936060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107936060
03009 Ribosome biogenesis [BR:
ghi03009
]
107936060
Messenger RNA biogenesis [BR:
ghi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
107936060
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
RNases
107936060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
XPG_I_2
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
107936060
NCBI-ProteinID:
XP_040965608
UniProt:
A0ABM3BEY9
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Position
D13:complement(64643164..64645223)
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AA seq
239 aa
AA seq
DB search
MRFQCWRLTSTTIFRYPPLPQFQCLLKSDKGKSKSNEKGSIEDKQSEADSSLLSENYKLP
LVWIDMEMTGLDIEVDRILEIACIITDGKLTKSVEGPDLVIHQSKECLDRMGEWCQNHHG
ASGLTQKVLESTVSEREAEKQVIEFVKRNVGTDTPHIAGNSIYMDFLFLKKYMPDLASLF
SHVVVDVSSIRALCMRWYPKDQENAPLKEKKHRAMDDIKESILELKYFKETIFKAKSKK
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttcagtgctggagattgacgtcgacgaccatcttccgctatccaccgcttcca
caatttcagtgtttattgaaatctgataaaggtaagagcaaaagcaatgaaaagggttca
attgaagataaacagagtgaagcggattcatcattgctttcagagaactacaagttacct
cttgtatggattgacatggaaatgactggtttagacattgaagttgataggatcctagag
atagcttgtataatcaccgatggcaagctcaccaaatcagtggagggtcctgatctggtt
atccatcaatctaaagaatgtttagatagaatgggggaatggtgtcaaaatcatcacgga
gctagtggattgacacagaaagtgctcgaaagtacagttagtgaaagagaagccgaaaaa
caggtcattgaatttgtgaagagaaatgttggtacagacacacctcatatagctggaaat
tctatttacatggattttcttttcttaaagaaatacatgcccgatttagctagtcttttc
tctcatgtagttgtcgacgtaagcagcatcagggccctttgcatgcgctggtatcctaaa
gatcaagagaatgcccctctcaaagaaaagaaacacagagccatggatgatatcaaagag
agcatattagaactcaagtacttcaaagagacgatatttaaagcaaaatcgaagaagtga
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