Gossypium hirsutum (upland cotton): 107936255
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Entry
107936255 CDS
T04793
Name
(RefSeq) pre-mRNA-splicing factor SLU7
KO
K12819
pre-mRNA-processing factor SLU7
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107936255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107936255
Spliceosome [BR:
ghi03041
]
Complex C
Other components
Step II factors
107936255
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
CrtC
Tudor_3
Motif
Other DBs
NCBI-GeneID:
107936255
NCBI-ProteinID:
XP_016724441
UniProt:
A0A1U8MC77
LinkDB
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Position
D02:5807035..5811095
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AA seq
543 aa
AA seq
DB search
MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKSDPNYTKSWYDRGAKIFQAEKYRKGACENCGAMTHDAKSCMERPRKKGAKW
TNMHIAPDEKIETFELDYDGKRDRWNGYDASTYARVIERYEARDEARRKYLKEQQLKKLE
EKNSKNEGEVEGEGEEGEISDEEDDDDALKVDEAKVDESKQMDFAKVEKRVRTTGGGSTG
TVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEKFYEGDNQYRMSGQAL
EFKQLNIHAWEAFDKGQDIHMQAAPSQAELLYKNYKVIKEKLKSKTKDTIMEKYGNAATE
EEIPVELLLGQSERQVEYDRAGRIIKGMETSLPKSKYEEDVFINNHTSVWGSWWKDHQWG
YKCCKQTIRNSYCTGAAGIEAAEAATDLMKSNIARKASSEDAPAPAQERKHVTWGTDVPE
DLVLDEKLLTEALKKEEERRREEKDERKRKYNVRWNDEVTAEEMEAYRMKRVHHDDPMKD
FLN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcatcagtggcgtttaaatcaagggaggatcaccgaaaacagctggaatta
gaggaagctcgaaaagcggggcttgctccggctgaggttgacgaggatggaaaagaaatt
aaccctcatattcctcagtatatgtcatcagcaccttggtatcttaacgctgaaagacct
agtttgaaacatcaacggaagtggaaatctgatcccaattataccaaatcttggtacgat
agaggcgcgaagatatttcaagctgaaaaatatcgaaaaggagcctgcgagaactgtgga
gccatgacacatgatgcaaagtcatgcatggagaggcctcgtaaaaagggcgcaaaatgg
acgaacatgcacattgcacctgatgaaaagatagagactttcgaactggattatgatggc
aagcgtgatagatggaatggttatgatgcatctacatatgctcgtgtcattgaaaggtat
gaggcaagggatgaggctagaaggaagtatctgaaagaacagcagctgaaaaagttggag
gagaaaaatagtaaaaacgagggagaggtagagggagagggggaggaaggagagattagt
gacgaagaagatgatgatgatgctctgaaggttgatgaagcgaaggttgatgagagcaaa
cagatggactttgctaaggttgagaagcgtgttcgtaccactggcggagggagcacggga
actgtgaggaacttgcgtattcgggaagacacagcaaaatatcttttgaatcttgatgtc
aattccgcatattacgatcccaaaactcgatcaatgcgtgaagatccacttcctgatgct
gatcctaatgagaagttctatgaaggtgataatcaatataggatgagtgggcaagcattg
gagttcaagcagctcaatattcatgcatgggaagcatttgataaaggtcaagatattcac
atgcaggctgctccatcccaagctgaactcctctacaagaattacaaggtcattaaagag
aagttgaaatcaaagacgaaagataccataatggaaaagtacggcaatgcagcgactgaa
gaagagatacccgtggagcttctcttggggcaaagtgagaggcaggtcgaatatgatcgt
gctggaaggattattaagggaatggaaacttctcttccaaaaagtaagtatgaagaagat
gttttcattaataatcacaccagtgtctggggctcctggtggaaggatcaccaatggggg
tacaagtgttgcaagcagaccattcgcaatagttactgtactggtgctgccggtattgaa
gctgcagaagcagccacagacttgatgaagtcaaacattgctcgtaaagcgtcctccgaa
gatgccccagctcctgcacaggagaggaaacacgttacttggggaaccgatgttcctgag
gacttggttctcgatgaaaaacttctcaccgaggctcttaagaaggaggaggagaggagg
agagaggagaaagatgaaagaaaacggaagtataatgtcagatggaatgatgaggtaact
gctgaggaaatggaggcatatcggatgaaaagggtacaccacgatgatccaatgaaggat
ttcttaaattga
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integrated database retrieval system