Gossypium hirsutum (upland cotton): 107936462
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Entry
107936462 CDS
T04793
Name
(RefSeq) ABC transporter B family member 6-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107936462
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107936462
04147 Exosome [BR:
ghi04147
]
107936462
04090 CD molecules [BR:
ghi04090
]
107936462
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107936462
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107936462
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107936462
CD molecules [BR:
ghi04090
]
Proteins
107936462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
Zeta_toxin
AAA_22
AAA_16
DUF87
Motif
Other DBs
NCBI-GeneID:
107936462
NCBI-ProteinID:
XP_016724676
UniProt:
A0A1U8MCW1
LinkDB
All DBs
Position
D10:63032728..63040961
Genome browser
AA seq
1406 aa
AA seq
DB search
MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDTSAEAAAAAAAAQVEADEEMEEAE
ELEPPPAAVPFSRLFACADRLDWVLMIVGSVAAAAHGTALVVYLHYFAKIVHVLGIGSSL
PEPERLDEQIDRFRELALTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQ
DMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLIIGFINCWEIVLI
TLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASVAEQAVSYIRTLYAFTNETLAKYSY
ATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHHRAHGGEIITALFA
IILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSGSNQEGNMSPSLQGNIEFRNVYF
SYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIK
NLKLEWLRSQIGLVTQEPALLSLSIKDNIAYGRDATLDQIEEAAKIAHAHTFISSLERGY
ETQVGRAGLALTEEQKIKLSIARAVLLNPTILLLDEVTGGLDFEAERTVQEALDLLMLGR
STIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLALDGLYAELLKCEEAAKLPRRTPV
RNYKETSTFQIEKESSSIYSFQESSSPKFIKSPSLQRVPGGFRAHDGAFNSQESPKAHSP
PPEKMQENGLPVDGGDKEPSIRRQDSFEMRLPELPKLDVQATQRPKSSGSDPESPVSPLL
TSDPKSERSHSQTFSRPLSHSGDIPMKDKEAHRREAPSFWSLAQLSFAEWLYAVLGSIGA
AIFGSFNPLLAYVIALIVTAYYRHQEPHHLQDEVDRWCLIIACMGIVTVVANFLQHFYFG
IMGEKMTERVRRMMFSAMLRNEVGWFDEEENNADTLSMRLANDATFVRAAFSNRLSIFVQ
DSTAVLVALLIGMLLHWRLALVAFATLPVLTVSAIAQKLWLAGFSKGIQEMHRKASLVLE
DAVRNIYTVVAFCAGNKVMELYRLQLKRILKKSLFHGMAIGFAFGFSQFLLFACNALLLW
YTALCVKRRYMDLPTAVKEYMVFSFATFALVEPFGLAPYILKRRKSLTSVFEIIERVPKI
EPDDNTALKPPNVYGSIELKNVDFCYPTRPEMLVLSNFSLKVNGGQTLAVVGVSGSGKST
IISLIERFYDPVAGQVLLDGRDLKTYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNA
SEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLD
EASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDS
LVAKNGLYVRLMQPHFGKGLRQHRLV
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatcaaggggtttgtttgggtggtcaccaccccatatacagcccttgacacca
gtatcagaggtttcggagccaccggaatcgccttctccgtacttagatacatctgcagaa
gcagcagcagctgctgctgcggcgcaggtggaggcggatgaggaaatggaggaggctgaa
gagctggagccgccacctgctgctgttcctttctcgagactctttgcctgtgctgatagg
cttgattgggttctcatgatcgttggatcggttgctgctgctgctcatgggacggctctt
gttgtttacttgcattactttgcgaagattgttcatgttcttggaattgggtcgtcacta
ccggagccggagagattggatgagcagattgacaggtttagagagcttgctttaaccatt
gtttatattgctgctggtgttttcgctgctggctggattgaggtttcgtgctggattttg
acgggagagaggcagactgctgtcatcaggtcaaaatatgttcaagttttattgaaccaa
gatatgagcttttttgatacttatgggaataatggagacatagtgagtcaagtattgagt
gatgtactgctcatccagtctgctcttagtgaaaaagttgggaattacattcataacatg
gctacatttttcagtggtctaattattggttttatcaactgttgggagattgttctcata
acactagctactggtccattcattgttgctgctggaggcatatccaatatatttcttcat
aggcttgctgagaacatccaagatgcttatgctgaggcagctagcgttgctgaacaggca
gtctcttacattaggaccttgtatgcatttacaaatgaaactttggccaaatattcttat
gcaacctcattgcaagcaactttgagatatggtatattgattagtcttgtacaagggctt
gggcttggatttacatatgggcttgctatatgttcttgtgccttacaactttgggtcgga
aggttcctggtcacacatcacagagctcatggtggtgaaataataacagctctttttgct
ataattttaagtggccttgggttgaaccaagcagcaacaaatttctactcatttgaccaa
ggacgaattgctgcttatagactttttgagatgattagtcggtcatcctctggctctaat
caggaagggaacatgtcaccctcccttcaaggaaatattgagtttcgcaatgtatatttt
agttatctctctcgacctgaaatccctatattgagtggattttacctcactgtacctgct
aaaaaggctgtggcccttgttggcagaaatggctctgggaaaagcagtattattccgctc
atggaacggttttatgatcctacattaggggaagttcttctagatggagagaatattaaa
aatcttaagctggagtggctgagaagccaaataggacttgttacccaggaacctgcatta
cttagtttgagcataaaagataatattgcttatggacgagatgctacgcttgatcaaatc
gaagaagctgcaaaaatagcacatgcccatacatttattagttcgcttgagagaggatat
gagacacaggtggggagggctggcttagcattgacagaagaacagaaaatcaaactttct
attgctagagctgtgcttttgaacccaaccatccttctgcttgatgaggtgactggtgga
cttgattttgaggctgaaagaactgtacaggaagctctagatcttctcatgttagggcgt
tcaaccataataattgctcgacgtcttagtctcataagaaatgctgattatatagctgtg
atggaagagggtcagctggttgaaatgggtacacacgacgagttactagcccttgatggc
ttgtatgcagagctccttaaatgtgaagaggctgcaaaacttccaaggaggacaccagtc
aggaactacaaggagacgtctactttccagattgaaaaggagtcttcatcaatttacagc
ttccaagaatcatcatctccaaaattcatcaaatcaccatctcttcaaagggttcctggt
ggattccgggcccatgatggtgcttttaactcacaagaatcacctaaggctcatagtcca
ccaccagagaaaatgcaggaaaacggtttgcctgtggatggtggtgataaggaaccatca
atcaggaggcaggatagttttgaaatgagactaccagagttgccaaaacttgacgttcag
gctacccagaggccgaaatcaagtggttcagacccagaatctcccgtatcaccccttctg
acttctgaccctaaaagtgaacgttcccattctcagacttttagtcgtcctctcagtcac
tctggtgacatcccaatgaaagataaggaagcacatcgtagggaagctccatcgttttgg
agtttggcacaacttagttttgcagagtggctctatgctgtgttgggaagcattggcgca
gcaatctttggctcttttaatccacttcttgcttatgttattgctctgatagtaactgca
tattataggcatcaggaacctcatcacttacaggatgaagtagacaggtggtgtttgata
attgcctgtatgggtatagtgactgttgttgctaactttttgcaacatttctactttggc
attatgggggaaaagatgactgaacgggttcgcaggatgatgttttcagcaatgctgcgc
aatgaagttggatggtttgatgaagaagagaataacgctgacaccttgtccatgcgcttg
gcaaacgatgctacatttgtacgggctgcttttagcaaccgactttcaatatttgtacag
gatagtactgctgttcttgttgctttgctaattgggatgttgctacattggcggttggcg
cttgtggcatttgcaaccctgccagttctaactgtctccgctattgcacagaaattatgg
ctcgctggattttctaagggaatccaggagatgcataggaaggcatcattggtccttgag
gatgcagtgagaaacatttacactgttgtagcattttgcgccggtaataaggtaatggag
ctctacagattgcagctgaagagaatattgaaaaagagtttatttcatggaatggcgata
gggtttgcttttggcttttcacagtttcttctttttgcctgcaatgctcttctcctttgg
tacactgcactctgtgttaaaagacggtacatggatctgcctacagctgtcaaggagtac
atggttttctcttttgctacttttgcactcgtggagccatttggattggcaccatacatt
cttaagaggcggaaatctctcacttcagtgtttgaaattattgagcgagtccctaaaatc
gagccagatgataacacggcattgaagccacctaatgtctacggaagcattgagttgaaa
aacgttgatttctgctatcctactcgtccagaaatgttggtcttgagcaattttagtctt
aaagttaatgggggacaaactttagctgttgttggagtttcaggctctgggaagagtacc
ataatatctttgatcgaaagattctatgatccagtagcaggtcaggttctacttgacggg
cgggatttaaaaacctacaatttgaggtggttgaggaatcacttgggtcttgttcaacag
gaacccataatcttctcaactactatcagggaaaacatcatatatgcaaggcacaatgct
agtgaagctgagatgaaagaggctgcaaggatagctaatgctcaccattttatcagcagc
ttgcctcatggttatgacacacatgttggtatgaggggtgtggatttgaccccaggacag
aaacaaagaattgccatcgctcgagttgtgctgaagaatgctcccatcttattattggat
gaagctagctcttccattgaatctgagtctagccgagtggtccaggaggcacttgatacg
ctgataatggggaacaaaactaccattttgatagcccatagagctgcaatgatgaggcat
gttgacaacattgtagtacttaatggtggtcgaattgtagaggaaggaacacatgattct
ttggtagccaaaaatggcttgtatgttcgtttaatgcaacctcattttgggaagggcttg
cgtcagcatcggctggtttag
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