KEGG   Gossypium hirsutum (upland cotton): 107936496
Entry
107936496         CDS       T04793                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107936496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107936496
Spliceosome [BR:ghi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107936496
 Complex B
    107936496
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4 Autophagy_act_C
Other DBs
NCBI-GeneID: 107936496
NCBI-ProteinID: XP_016724716
UniProt: A0A1U8MD08
LinkDB
Position
A08:119192515..119193870
AA seq 281 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLSNMYQRPDMITP
GVDPQGQPIDPRKIQEHFEDFYEDIYEELSKFGEIESLNVCDNLADHMIGNVYAQFREED
QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKVIGRDL
RRKLFGSYRKYRGHRSRSRSGSPRPRRDRDRDRHRDRDDNRDRNGRRPDRTDRDAGGRRK
NGSPKRSHSRSRSRSPPPAREGSEERRARIEQWNREREEKP
NT seq 846 nt   +upstreamnt  +downstreamnt
atggcggaacacttagcctctatcttcggtaccgagaaggaccgtgttaattgtcccttt
tatttcaagattggagcttgccggcacggtgaccggtgctcacgtctccataaccggccg
acgatctccccaaccatccttctttccaacatgtatcagcggccagatatgatcactccc
ggagtagatccccaaggacaacccatagatcctcgcaagatccaggaacatttcgaggat
ttctacgaggatatctacgaggaactaagcaagttcggtgagatcgagagtcttaacgtt
tgtgataacctcgccgatcacatgattggaaacgtatatgctcagttcagggaggaagat
caagcggcagccgctctccaggcacttcaaggaaggttttactccggtcgacccatcatt
gccgatttttccccggttaccgatttccgtgaagccacgtgtcggcaatacgaggagaat
aactgtaaccgtggtggttattgcaatttcatgcacgtcaaagtaattgggagagacctt
agaaggaaactgttcggaagttaccggaaatacagaggacatcggagtaggagcagaagc
ggaagtcctcgcccccgccgtgatagggatcgcgaccgtcaccgtgaccgtgatgataat
cgcgataggaatggtcgaagacctgataggactgaccgtgacgccggtggtcggagaaaa
aatggaagtcctaaacgaagccatagtcgaagccgaagccgaagccctccacctgctagg
gaagggagtgaagaacgtagagccaggattgaacaatggaatcgagaaagggaagagaag
ccataa

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