Gossypium hirsutum (upland cotton): 107936504
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Entry
107936504 CDS
T04793
Name
(RefSeq) pre-mRNA-splicing factor 18
KO
K12817
pre-mRNA-splicing factor 18
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107936504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107936504
Spliceosome [BR:
ghi03041
]
Complex C
Other components
Step II factors
107936504
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
PolyG_pol
Motif
Other DBs
NCBI-GeneID:
107936504
NCBI-ProteinID:
XP_016724732
UniProt:
A0A1U8MD01
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Position
A08:118918827..118921607
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AA seq
415 aa
AA seq
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MDLLKEELLKKRQSLAQETGGRRVFKRSEIEQKQIQKLREQEKRELEAKSRRQSNASSSA
ANDASAKSNPSASSTVSATATSAAGSSKSLTDERNIDDLDLPKQEVIRRLRFLKQPVTLF
GEDDAARLDRLKYVLKAGLFEVDSDMTEGQTNDFSRDIAELRKRQKTGIVSERKRKDREE
GGGGEDGDGGGGEEELSGDGGSSGVDMDKDLKRMKANFDELCGEDKILVFFKRLLNEWNQ
ELDEMGEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRD
YLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRL
MTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEEKFSGGNSSEERLRLMPAPKEN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctcaaagaagagcttctcaagaagcggcaaagcttagctcaggagaccggc
ggcaggcgtgtatttaaacgctccgagattgagcagaagcaaatccagaagcttcgcgag
caagaaaaacgagaactcgaagctaaatctcgccgtcaatcgaacgcctcttcctccgct
gcgaacgacgcttcggctaaatccaatccttccgcttccagtactgtctccgcgactgcg
acttccgccgccggttcttccaaatccctcaccgatgaacgaaatatcgatgacctcgac
cttccgaagcaagaagtcattcgccgacttcggttcctcaaacagcctgtcactcttttt
ggggaagacgacgcggctcgtctcgacaggttgaaatacgtcttaaaagctggacttttc
gaagtcgatagcgatatgaccgagggtcaaactaatgatttctcgagagacatagcggag
ttgcggaagcggcagaagacggggatcgtgagcgagaggaagaggaaggatagggaggaa
ggtggtggaggagaggacggggatggaggcggcggagaagaagagctgagtggtgatggt
ggatcaagcggagtcgatatggacaaggacttgaaaagaatgaaggcgaatttcgatgag
ttgtgtggtgaagataagattctggtgtttttcaagagattgttgaatgagtggaatcaa
gagctggatgagatgggtgaggctgagaaaaggacggcgaaaggcaagtccatggtcgcc
acgtttaagcagtgcgctcgttatttgaaccccttgttcaagttttgtaggaagaaggtt
cttcccgatgatatccgtcaagcattattggtggtggttgagtgttgcatgaagcgggac
tacctagccgcaatggaccagtacattaaattggctatcggtaatgcaccctggccaatt
ggtgtcactatggttggtatccacgaacgttcagctcgtgagaagatctacaccaacagt
gttgcacacataatgaatgacgagacaactcggaaatacttgcaatcaatcaaaagattg
atgaccttttgtcaacgccgttaccccacactcccatctaaagcagtcgagttcaacagc
ttggccaacggtagtgacttacagtcactgctcgcagaagagaagttttctgggggtaat
tcttcagaggaaaggcttaggctaatgccagctccaaaggaaaactag
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