KEGG   Gossypium hirsutum (upland cotton): 107936504
Entry
107936504         CDS       T04793                                 
Name
(RefSeq) pre-mRNA-splicing factor 18
  KO
K12817  pre-mRNA-splicing factor 18
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107936504
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107936504
Spliceosome [BR:ghi03041]
 Complex C
  Other components
   Step II factors
    107936504
SSDB
Motif
Pfam: Prp18 PRP4 PolyG_pol
Other DBs
NCBI-GeneID: 107936504
NCBI-ProteinID: XP_016724732
UniProt: A0A1U8MD01
LinkDB
Position
A08:118918827..118921607
AA seq 415 aa
MDLLKEELLKKRQSLAQETGGRRVFKRSEIEQKQIQKLREQEKRELEAKSRRQSNASSSA
ANDASAKSNPSASSTVSATATSAAGSSKSLTDERNIDDLDLPKQEVIRRLRFLKQPVTLF
GEDDAARLDRLKYVLKAGLFEVDSDMTEGQTNDFSRDIAELRKRQKTGIVSERKRKDREE
GGGGEDGDGGGGEEELSGDGGSSGVDMDKDLKRMKANFDELCGEDKILVFFKRLLNEWNQ
ELDEMGEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRD
YLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRL
MTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEEKFSGGNSSEERLRLMPAPKEN
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggatcttctcaaagaagagcttctcaagaagcggcaaagcttagctcaggagaccggc
ggcaggcgtgtatttaaacgctccgagattgagcagaagcaaatccagaagcttcgcgag
caagaaaaacgagaactcgaagctaaatctcgccgtcaatcgaacgcctcttcctccgct
gcgaacgacgcttcggctaaatccaatccttccgcttccagtactgtctccgcgactgcg
acttccgccgccggttcttccaaatccctcaccgatgaacgaaatatcgatgacctcgac
cttccgaagcaagaagtcattcgccgacttcggttcctcaaacagcctgtcactcttttt
ggggaagacgacgcggctcgtctcgacaggttgaaatacgtcttaaaagctggacttttc
gaagtcgatagcgatatgaccgagggtcaaactaatgatttctcgagagacatagcggag
ttgcggaagcggcagaagacggggatcgtgagcgagaggaagaggaaggatagggaggaa
ggtggtggaggagaggacggggatggaggcggcggagaagaagagctgagtggtgatggt
ggatcaagcggagtcgatatggacaaggacttgaaaagaatgaaggcgaatttcgatgag
ttgtgtggtgaagataagattctggtgtttttcaagagattgttgaatgagtggaatcaa
gagctggatgagatgggtgaggctgagaaaaggacggcgaaaggcaagtccatggtcgcc
acgtttaagcagtgcgctcgttatttgaaccccttgttcaagttttgtaggaagaaggtt
cttcccgatgatatccgtcaagcattattggtggtggttgagtgttgcatgaagcgggac
tacctagccgcaatggaccagtacattaaattggctatcggtaatgcaccctggccaatt
ggtgtcactatggttggtatccacgaacgttcagctcgtgagaagatctacaccaacagt
gttgcacacataatgaatgacgagacaactcggaaatacttgcaatcaatcaaaagattg
atgaccttttgtcaacgccgttaccccacactcccatctaaagcagtcgagttcaacagc
ttggccaacggtagtgacttacagtcactgctcgcagaagagaagttttctgggggtaat
tcttcagaggaaaggcttaggctaatgccagctccaaaggaaaactag

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