Gossypium hirsutum (upland cotton): 107936509
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Entry
107936509 CDS
T04793
Name
(RefSeq) F-box protein SKIP17
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107936509
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107936509
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GFIT
Motif
Pfam:
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
107936509
NCBI-ProteinID:
XP_016724741
UniProt:
A0A1U8MD36
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Position
A08:118924280..118928747
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AA seq
540 aa
AA seq
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MDTLHHHHHHHHPTPPPISSSTSMAKRPCSSSSSQNPRLPPHFSQMDHLLHSFLSFPDSS
PPISLDLSLDRLLDSSPSDADQSILIDRAHRLGCLLLRAANRSARKRASIHNSVAWVLPP
DLTIKVFSMLDSQSLCYAAATCSMFNKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAG
KSLQSLKLGIVPGPTGSPGSCQPLVYTIRNSGDVSNFSWNEKRTRQGKESSILTRSCLYP
LSGDNGATGTLLRRLHLYNIERMDNASLCVALAACPSLLDLEIVGLHVELRQTLMSVSSH
CRFIERLFFESSKTGRDDSLKSPTCFELVNNCPNLSSLSLRGFKLHDYKVRILVKGFRKL
KYADFSTSYSITGTFLRNLGNGGGGSLLEDLILRDCMHLKEMEVARFLTAVIAGDFKFLK
HLDISNREGLASEGDWYQRSYNSSLIPLQQVLEVRPDICLLAEFPSEGCFLDIDHMIDSD
FNSELSLPFQQSGETSDGALVTSSLESSYNSDQGSGNEEYQDSGFVIYEESSDEVDFLVV
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggataccctccatcaccaccaccaccaccaccaccccactcctccgccgattagttcc
tcaacttccatggccaaacgcccttgctcttcttcttcatctcaaaaccctaggcttcct
cctcacttctctcaaatggaccatctcctccactctttcctttctttccccgattcatct
cctcctatttcccttgacctttccttggaccgcctcctcgattcctccccttccgacgcc
gatcaatctatcctcatcgatcgtgctcaccggctaggttgcctcctcctacgtgctgcc
aatcgttccgctcggaaacgtgcttcgattcataactccgttgcttgggtcctcccgcct
gatctcactatcaaggtgttttcgatgctggattcgcagagtctttgctacgccgcggcg
acgtgttcgatgtttaacaagtgtgctatggatcctttgtgctatgccaatatcgacctt
actactgtcgtgcctaaggttaataatgccgttgtttccaccatgatccaacgagctggc
aaatcactccaatctcttaagcttggtatagtacctggcccgaccgggtctcctggttcc
tgtcaaccattggtgtataccatcaggaactctggagatgtatcgaacttttcgtggaac
gagaaaaggacgaggcaaggaaaggaatcatccattcttacaaggtcctgcttatatcca
ttaagtggggacaatggtgccactggaactcttctgaggaggttgcatctatacaatatc
gaaagaatggacaatgcatcactttgtgtggcattagcagcatgcccttctttacttgat
ttggagattgttggccttcatgttgagctgaggcaaactttgatgtcagtgagctctcat
tgtcgcttcatagagcgattattctttgagtcttccaaaactgggagggatgacagcttg
aaatcgccaacttgttttgagttagtgaacaattgtcctaatctttcatctttgtcgctg
agaggttttaaactgcatgattataaagttcgcatacttgttaagggattccgtaaactg
aaatatgctgatttttcaacgtcatactcgatcactggaacctttttgaggaatttggga
aatggcggtggtgggagtctactagaggatttaatattaagggattgcatgcatctcaaa
gagatggaagttgctcggttcttgacagctgttattgcaggagattttaagttccttaaa
catcttgacatatctaatagggaaggtttagcttcagaaggtgactggtatcagagatct
tacaactccagtttgattcctttacagcaggttttggaagtaagacctgatatttgtctg
ctagctgagtttccatcggaaggatgcttccttgacatagaccacatgattgatagtgat
tttaacagtgagctcagcctgccattccagcagagcggcgaaacttctgacggtgcattg
gttacgagttcattagagagcagttataatagtgatcaaggtagcggtaatgaggagtat
caagattcaggttttgtaatttacgaggaaagctcagatgaggtggattttctggtcgtc
taa
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