Gossypium hirsutum (upland cotton): 107936659
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Entry
107936659 CDS
T04793
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00531
Glycosaminoglycan degradation
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
107936659
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ghi00536
]
107936659
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
107936659
Glycosaminoglycan binding proteins [BR:
ghi00536
]
Heparan sulfate / Heparin
Enzymes
107936659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
107936659
NCBI-ProteinID:
XP_040934135
UniProt:
A0ABM2YUG2
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Position
A10:complement(115135806..115138292)
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AA seq
521 aa
AA seq
DB search
MMNFKSITFFVVFLSFLLVSKAEKVDVVVEGATSIAQTDEDFICVTLDWWPTNKCDYDQC
PWGQAGLFNLDLKNKILEKAVKAFNPLRIRVGGSLQDQVVYNVRNNIENCQPFQKQDKDF
LFGFSIGCLDMKRWDELNEFFNQTRAKVTFGLNALIGRKESETEKTLWVGDWYSHNARDL
MSYTISKGYKIDSYELGNELCGVGVSAKIEAKQYAKDMATLKNLVKEMYPNPKTQPKVLG
PGGFYDKKWFDTFLDASGHDVIDGVTHHIYNLGPGNNPDVVHRVQDPFFLTQIAQTFKDV
SNAIDKFAPWSGAWVSESGGAYNSGGQLVSYTFAFGFWYLDQLGMTSVYNHKVYCRQALT
GGNYALLNTTTFIPNPDYYGALLWHKVMGSKVLSVTHKGSLYLRVYSHCAKKEPGISFVF
INLSKNTSFEIDLFRDLNLNGGSSSFLFKGHKEREEYHLTPKDGNILSSVVLLNGTPLEL
SDSLEIPKLKPKLVDGLKPISIVAHSIAFVTIRDFNAPACS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatttcaaaagtataacgttttttgttgtgtttttgtcatttcttctggtctca
aaggccgaaaaagttgatgttgtggttgaaggagcaacttccattgctcaaaccgatgaa
gattttatttgtgttacccttgattggtggcctacaaacaagtgtgattacgatcaatgt
ccgtggggtcaagctggactttttaatttggatttgaagaacaagattcttgaaaaggct
gtaaaagcatttaatcctttgagaattagagttggaggttcgttgcaagatcaagtggtg
tacaacgttcgaaataatattgagaattgccaaccattccaaaaacaagacaaggacttt
ttatttggtttctccattggatgtcttgacatgaagagatgggatgaactcaatgagttt
ttcaatcaaactcgagccaaagttacatttggtttaaatgctcttattggaagaaaagag
tctgaaactgaaaagacactttgggttggtgattggtattcacataatgctcgagatctc
atgagttatacaatttccaaaggatataaaattgactcttatgaattaggaaatgaattg
tgtggagtaggagttagtgctaagattgaagctaaacaatatgcaaaagatatggcaaca
cttaaaaatcttgtaaaagagatgtatccaaatcctaaaactcaacctaaagttttaggc
ccgggaggtttctatgacaagaaatggttcgatacttttttggatgcttcaggacatgat
gttattgatggagttactcatcatatttataatcttggacctggtaataacccagatgtg
gttcatcgtgtccaagatccatttttcttgactcaaattgctcaaacatttaaagatgtt
tcaaatgctattgacaaatttgcaccgtggtctggtgcatgggttagtgaatccggcgga
gcttataacagtggtggccaattagtgtcgtatacatttgcatttggcttttggtacttg
gaccaattgggaatgacatcagtttataaccacaaagtttattgtagacaagctttgacc
gggggcaattatgctcttcttaatactactacattcattcctaatccagattattacggt
gcgcttttgtggcataaagttatggggagtaaagttctttccgtcacacataagggttct
ctatatttgcgtgtatactcccattgtgccaagaaggagcccgggatttctttcgttttt
atcaacttatcgaaaaatacctcttttgaaattgatcttttccgtgatctaaatttaaat
ggtggaagttcaagttttctttttaaaggacataaagagcgagaagagtatcatttgact
ccaaaagatggaaatatcttaagcagtgtcgtattgctgaacggaacaccgctagaactt
tcagactcgttggagataccaaaattgaagccgaagcttgtggatggtttgaaacctatt
agcatcgttgctcattcaatcgcattcgtaaccataagagatttcaatgctcctgcatgt
tcttag
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