Gossypium hirsutum (upland cotton): 107936668
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Entry
107936668 CDS
T04793
Name
(RefSeq) protein NEDD1-like
KO
K16547
protein NEDD1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107936668
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107936668
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
107936668
Microtubules and associated factors
gamma-tubulin ring complex
107936668
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
107936668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EML
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_DCAF12
NYD-SP28_assoc
Beta-prop_WDR35_TULP_N
bZIP_2
PsbK
Motif
Other DBs
NCBI-GeneID:
107936668
NCBI-ProteinID:
XP_016724906
UniProt:
A0A1U8MDL3
LinkDB
All DBs
Position
A10:complement(115094577..115100059)
Genome browser
AA seq
791 aa
AA seq
DB search
MNLPDPSSELLAASGGDTVKIFDIKLEPNDPCVLSYSPSPSCIVNSVKWNHTNLVVASAG
EDKKISLWRKNGQRIGTIPVDGTDSGDNIEESILAISFSNKGSRYICSGGSGQVVRIWDL
QRKRCIKWLRGHTSSITGVMYNCKDEHLASISLSGDLILHNLASGAKAAELKDPDAQELK
VLDYSRISRHILVTAGDDGSVHLWDTTGRSPKVSWLKQHSAPTAGISFSPSNDKIIASVG
LDKKLYTYDSGSRRPSAFISYEAPFSSLAFKDDGWTLAAGTGNGRVVFYDIRGKLQPFTV
LRAYSCSEALSSLCWQRSKPAIVNESTCTAETALLGGAMEDSVLMPDPLPSVTSTSLSSS
TAVSGSRITGRSGPAEVSSLTSSSGSTSSTLNLSSSLETPIRSHLWPGGTLTRLHAPRST
FNFKDDMEVFSPLVDVHPITPSLDKLWDGHDGAKKEHLPNDKKPSSLLFPSSRRFAFADD
GASDHPILDWKSSSMSQQDVTKSFTALESTPTPSSKSEETSITPPEAWGGEKISDKFAHL
RQLPSRFGMPASGGLTTSSIYAGQDQSSMLSQTSSNLSYENLHTKDVSSNHETSSLGFPE
HFSSSSMSALSFGSKGITRAGSLDSPKLASLAPPRRFSTYAERISTTSAFSDGTSHLVAS
PKTKKTGAETREELFNSLLSRSDSLTAAASGVLPAMNGGTLQPPRASQQDPQQGSNFTLQ
LFQRTLEETLDSFQKSIHGDMRNLHIEILRQFHMQEMEMSRVMSSILQNQAELMEEVKSL
RKENQQLRQLL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaccggatccgtcgtcggagttactagcagcaagtggcggcgacaccgtgaag
atattcgacatcaagcttgaaccgaacgatccttgcgttttaagttactcaccttctccg
agttgcattgtcaactcggttaaatggaaccacactaatttagtggtggcgagtgccgga
gaggataagaagatatccttgtggcggaaaaatgggcagaggattgggacaattccggtt
gatgggactgatagtggagataacattgaggagtccattttagctattagctttagcaac
aagggatccagatacatatgttcaggaggaagtggtcaagttgtgagaatatgggatttg
cagcggaagcgttgcatcaaatggttaaggggtcataccagctcaataacaggtgttatg
tataactgcaaagatgaacacttggcctccatcagcctaagtggggatctgatacttcac
aaccttgcttctggagcaaaggctgctgaattaaaagatcctgatgcacaggaactaaag
gtacttgattattcgcggattagtcgacacattttggtgactgcaggtgatgatggatct
gtccatttatgggataccactggtcgtagcccaaaggtctcttggttgaaacagcactct
gctccgacagctggcattagtttctcaccctccaatgataagattattgctagtgttggg
ttggataagaagctatacacttatgactcagggtctagaagaccctcagctttcatttca
tatgaggcacctttttcttcattggcatttaaagatgatggttggacactggcagctggt
actggtaatggtagagtggtgttctatgatattcggggaaaactacagccttttactgtt
cttcgtgcttatagttgttcggaggctctttcaagtttatgttggcaaagatcaaaacca
gccattgttaatgagagtacttgcactgctgagactgctcttttgggaggtgcaatggag
gattctgttcttatgccagacccacttccatctgtgacatcaacaagcctttcatcatcc
actgcagtttctggttctcgtatcactggccgttcaggtcctgcagaagtatcttctctt
actagtagtagtggatcaacatcaagcacactcaatctctcttcttctctcgaaacacca
attagaagccatctatggccaggtggaacactaacgagattacatgctcctcgttctaca
ttcaatttcaaggatgatatggaggtattttcccctcttgtggatgttcatcctattaca
ccctcgctggataagctctgggatggtcatgatggtgcaaagaaagagcacctacccaat
gataagaagccatcctccctgctgtttccttctagcaggaggtttgcttttgctgatgat
ggagctagtgatcacccaatacttgattggaagtccagttcaatgtctcaacaggatgtg
acgaagtcttttacagcattggaatctacccctacaccgtcttccaagagtgaagagact
tccatcactcctccagaagcttggggtggtgagaagatatctgacaaatttgctcacctt
cgccagctgccatctcgttttgggatgccagcttctggtggtctgacaacgagctctatt
tatgctggacaagatcagtcttcaatgctcagtcagaccagttctaacctgagctatgaa
aatttgcacacgaaagatgtctcttcaaatcatgagacttcttcattgggatttcctgaa
catttctcctcgagctccatgtctgctttatcttttggttcaaaaggcattactagagct
ggcagccttgactcaccaaaactagcatctttagcaccgcctcgaaggttttcaacatat
gctgagagaattagtactacatctgcttttagtgatggaacatcccatttggtggcttct
ccaaaaacaaagaaaacgggagctgaaaccagagaagagctgtttaatagcctgttatcg
aggtctgattcattgactgcagcggcatcaggagttcttccagcaatgaatggaggaaca
ttacaaccccccagggcatctcaacaagatccccaacaaggaagcaactttactcttcag
ctatttcaacgaactctagaagaaaccctcgattcatttcagaaatccattcatggagat
atgaggaacttgcatattgaaattttaagacaattccacatgcaggagatggagatgtct
cgtgtgatgagctccatattacagaaccaagctgaactgatggaagaggttaagtctctc
aggaaagaaaatcagcagcttcgtcaattgctttga
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