Gossypium hirsutum (upland cotton): 107936747
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Entry
107936747 CDS
T04793
Name
(RefSeq) homeobox-leucine zipper protein HDG2 isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107936747
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
107936747
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
Cnn_1N
MRP-L20
HTH_Tnp_1
Motif
Other DBs
NCBI-GeneID:
107936747
NCBI-ProteinID:
XP_040944553
UniProt:
A0ABM2ZPH0
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Position
D02:complement(48350605..48355743)
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AA seq
757 aa
AA seq
DB search
MPAGVMIPARNMPSMITGNGSVSGYGTSSGLTLGQQPNNMMEGQLHPLEMTQNASESEIV
RMRDEEFDSTNKSGSENHELGGSGDDQDPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDD
KQRKELGRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALST
ASCPNCGGPTAVGQMSFDEHHLRLENSRLREEIDRISAIAAKYVGKPVVNFPLLSSPAPP
RPFDFGSQPVTEEMYGVGDLLRSISAPSEADKPMIIELAVAAMEELVRMAQMGEPLWMTS
LDGTTCMLNEEEYIRTFPSGIGPKPTGFKCEASKETTVVIMNHINLVEILMDVNQWSTLF
SGIVSKASTLDVLSTGVAGNYNGALQVMTAEFQVLSPLVPTRESYYVRYCKQHAEGTWAV
VDVSLDTIRPSPTVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDGGVHNLYKQLVSSGH
AFGARRWVSTLDRQCERLASLMASNIPTGDVGVITNQDGRKSMLKLAERMVISFCGGVSA
STAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVSPKRVFDFLRDEHS
RSEWDILSNGGAVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLILQESCTDPTASFVI
YAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGMTVTDVGMADSGGSSGSLLTVAFQIL
VDSVPTAKLSLGSVATVNNLIACTVERIKASLSCDNA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgccagccggagtaatgatcccggcgagaaacatgccgtcgatgatcaccggaaacggg
agcgttagtggttatggaacatcctcaggacttactcttggtcagcaacctaacaacatg
atggaaggtcaactccaccctcttgagatgacccaaaacgcttctgaaagtgaaattgtt
cgaatgagagacgaagaatttgacagtacaaacaaatctggtagcgaaaatcatgaatta
ggtggctctggagacgatcaagatcctcgtcccaacaaaaagaagcgttatcatcgccat
acccagcatcagatccaagaaatggaggcatttttcaaagagtgtccacacccagatgac
aagcaaaggaaggagcttgggcgtgagttagggttagaaccgttgcaagtcaaattctgg
ttccaaaataagcgcacccaaatgaagactcagcatgagcgtcacgaaaacacacagctg
cgaactgagaacgagaagctaagggctgacaacatgagatatagggaagctttgagcact
gcttcatgcccaaattgtggaggtccaactgctgttggacaaatgtcatttgatgaacat
catctcagacttgagaattctcgattaagggaagagattgatcgtatatcagcaatagct
gcaaagtatgtgggcaagccagtggtgaactttcctctactttcatctcctgcgcctcct
cgaccatttgatttcggttcacaacctgtcactgaggagatgtatggtgttggggatctt
ctcaggtctattagtgcaccttctgaggccgataagccaatgattattgagcttgcggtg
gcagctatggaggaactggttagaatggctcagatgggggaacctttatggatgaccagt
cttgatggtaccacctgtatgctgaatgaagaagaatatattaggacttttcctagcgga
attgggccaaaacctactggctttaaatgcgaagcttcaaaagaaactactgttgttatc
atgaaccacattaaccttgttgagattctcatggatgtgaaccagtggtcaactctgttt
tcgggaatagtttcgaaggcttcaactttggatgttctctcaacaggagtagcagggaat
tataatggagcccttcaagtgatgacagctgaatttcaagttctttcacctcttgttccc
actcgtgagagttattatgtaagatactgcaaacagcatgccgagggaacttgggctgtg
gttgatgtttccttggatactatacgccccagtcccactgtgagatgcagaagaagacca
tctggttgcctaattcaagaaatgcccaatggctactcaaaggttacatgggttgagcat
gtagaagtggacgatggaggtgttcacaatctgtacaagcaactggtaagctccggccat
gctttcggagcaagacgatgggtttctactttagatcgacagtgtgagaggcttgcaagt
ttaatggcttctaacattcccaccggcgatgttggggtgataacaaatcaagatgggaga
aagagtatgctgaagctagctgagcgaatggtaatcagtttctgtggaggagttagtgcc
tctacagcacacacgtggacgacattatcgggaactggggctgatgatgtaagggtgatg
acccgaaagagtgtagatgatccaggtagacctccagggattgtgcttagtgctgcaacg
tcgttttggctccctgtttcacctaagagggtttttgatttcctcagagatgagcattct
cgaagtgagtgggatattctgtctaatggcggagctgtccaagaaatggcacacattgct
aatggtcgggatccaggcaattgtgtttcactacttagagtaaatagtgcaaattcaagc
cagagcaacatgctgattttacaagagagttgcactgatccaacagcctcttttgtgatc
tatgctcctgttgatattgttgcgatgaatgttgtcctaaatggaggggacccggactat
gttgctcttcttccctcgggtttcgcaatactgcctgatggaatgactgtgactgacgta
ggaatggctgattccggcgggtctagtggatctcttctaactgttgcatttcagattttg
gtcgattctgtgccgacggcaaaactttctctcggatccgttgcaacagtaaacaatttg
attgcatgcaccgttgaaaggataaaggcatctctgtcatgcgataatgcatga
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