KEGG   Gossypium hirsutum (upland cotton): 107936781
Entry
107936781         CDS       T04793                                 
Name
(RefSeq) ubiquitin-like isoform X1
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03010  Ribosome
ghi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    107936781
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107936781
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:ghi03011]
    107936781
   04121 Ubiquitin system [BR:ghi04121]
    107936781
Ribosome [BR:ghi03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    107936781
  Archaea
    107936781
Ubiquitin system [BR:ghi04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   107936781
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ribosomal_L40e Ubiquitin_2 Rad60-SLD_2 TBK1_ULD UBL_UBAC1 Plexin_RBD Dsc3_N DUF2604 Ubiquitin_5 OTU1_UBXL HATPase_c
Other DBs
NCBI-GeneID: 107936781
NCBI-ProteinID: XP_016725026
UniProt: A0A1U8MDV4
LinkDB
Position
A11:123109786..123119408
AA seq 107 aa
MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVFRLRGGIIEPSLMALARKFNQDKMICRKSLYRELCGT
NT seq 324 nt   +upstreamnt  +downstreamnt
atgcagatattcgtgaaaaccctaaccggaaagaccataactctcgaggtcgagagcagc
gacaccatcgataatgtcaaaaccaagatccaagacaaagaaggaattcccccggaccaa
caacgtttaatttttgctggtaaacaacttgaagatggccgtacattggctgattacaac
attcaaaaagaatcaacgcttcatcttgttttcaggttgagaggtggaattattgagcct
tctttaatggctttggctcgtaaattcaaccaagacaaaatgatttgccgcaagtctctt
tacagggaactttgcggaacttag

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