Gossypium hirsutum (upland cotton): 107936816
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Entry
107936816 CDS
T04793
Name
(RefSeq) RHOMBOID-like protein 2 isoform X1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107936816
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
107936816
Peptidases and inhibitors [BR:
ghi01002
]
Serine peptidases
Family S54: Rhomboid family
107936816
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
CcmH
EMC6_arch
GAPES1
Motif
Other DBs
NCBI-GeneID:
107936816
NCBI-ProteinID:
XP_040939692
UniProt:
A0ABM2ZBU4
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Position
A12:107687459..107689656
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AA seq
333 aa
AA seq
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MAGGDIENRGGGAKRYSNSINDSSGGSYISSSTYMIDDTEPQWTSWLVPVFVVANVAFFV
VVMYVNNCPRHKLVGKCVARFLGRFSLEPLRENPLFGPSSSTLKKLGALEWTKVVINHQG
WRLITCIWLHAGVFHLLANMLSLIFIGIRLEQQFGFLRIGILYLVSGFGGSVLSSLFIRN
NISVGAPGALFGLLGAMLSELITNWTIYTNKASALLTLVVIIVINLAIGILPHVDNFTHI
GGFLTGFLLGFILLPRPQLGWLEHGNIPVRTGLKSKYKPHQYVLWVASIVLLVVGLAVAL
VVLFREEDGNEYCTWCDYLSCVPTSRWDCNQNN
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcagggggtgatatagaaaacagaggaggaggggcaaagagatacagcaatagcatt
aatgatagcagcggcggcagttacatatcatcatctacttacatgatagacgatacagaa
cctcaatggacatcatggttggtgcctgtcttcgtggtggctaacgttgctttctttgta
gttgttatgtatgtcaataattgtcctaggcacaagcttgtaggcaagtgcgttgccagg
tttcttggtcgtttttctttggagcctttgagagagaatcccctgttcggtccctcttct
tccacattgaaaaaattaggagctcttgaatggaccaaagttgtaattaaccatcaagga
tggaggcttataacatgtatttggttacatgccggtgtttttcatcttctagccaacatg
ctaagcctcatctttatcggaatacgccttgaacagcagttcggtttcttacggattgga
atcctctatcttgtatcgggattcggcggaagcgtgttatcatctctatttatccgtaac
aacatctccgtcggtgcccccggtgctcttttcgggcttctaggcgcaatgctttccgaa
cttataacaaactggaccatatacacaaacaaggcttcagctttgctaacccttgtggtc
atcattgtgattaacctagcaatagggattttgccacacgtcgataatttcacgcatatc
ggcgggtttttaaccggatttttacttgggtttattctactacctcggcctcaattaggg
tggttggaacacgggaacatcccggtcaggactggtttgaaatcgaagtacaagcctcac
caatatgtcttgtgggtagcttccattgtgctgttggttgtaggactcgccgtagcattg
gtagtgttgtttcgggaagaagacggtaacgaatattgcacatggtgtgactacctcagc
tgtgtcccaacctctagatgggattgcaatcaaaacaactag
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