Gossypium hirsutum (upland cotton): 107936848
Help
Entry
107936848 CDS
T04793
Name
(RefSeq) RNA-binding protein BRN1 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107936848
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107936848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
GHMP_kinases_C
Motif
Other DBs
NCBI-GeneID:
107936848
NCBI-ProteinID:
XP_016725105
UniProt:
A0A1U8ME98
LinkDB
All DBs
Position
D12:complement(957061..962271)
Genome browser
AA seq
436 aa
AA seq
DB search
MAEGKKEKKATNEESVKLFVGQVPKHMTEAQVLAMFEEFALVDEVNIIKDKATRASRGCC
FVICPSREEADKAVNACHNKKTLPGASSSLQVKYADGELERLEHKLFVGMLPKNVSEDEV
SALFSKYGTLKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK
WADTEKERQARRAQKAQSQASNMPNADSPHPSLFGALPMGYVPPYNGYGYQAPGSYGLMQ
YRLPPMQNQPAFNNMIPHVNQGSSLRGITPDLAPNIAPRNYAVPPTSYVGSAYPAVPGLQ
YPMAYPGGIMNHRLLTGSPGSVPQANINSNSSSSSPVGTNSGGHIEGPPGANLFIYHIPQ
EFGDQELANAFQGFGRVLSTKVFVDKATGVSKCFGFVSYDSPAAAQNAINMMNGCQLGGK
KLKVQLKRDNKQNKPY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggaaaaaaggagaagaaagcgacgaacgaagagagcgtgaagctgttcgtt
ggtcaagtgccgaagcacatgacggaagctcaagttctcgcaatgttcgaagagtttgct
ttggtagacgaagtcaacatcatcaaagacaaggctactcgtgcctctagagggtgttgc
tttgttatatgcccgtcaagagaagaggctgataaggcggtcaatgcttgtcataataag
aagacattacctggggcatctagttcattgcaagtgaagtatgcggatggcgagttggaa
agattagagcacaaactctttgttggcatgttgccaaagaatgtctctgaagatgaagtt
tctgctttattttctaaatatggaaccctaaaggacctacagattctaagaggttctcaa
caaacaagtaaaggctgtgcctttttgaagtatgagacaaaagaacaagcccttgctgcc
ctggaggccattaatggaaagcataaaatggagggttcaagtgtccctctcgttgtcaaa
tgggcagatacagaaaaggaaagacaagctcgaagggcccagaaagcccaatctcaagct
tcgaacatgccaaatgctgattcaccacatccttcattgtttggagccttgccaatgggt
tatgttcctccatataatggatatggatatcaggctccaggaagttatggacttatgcag
taccgcttgccaccaatgcagaaccaacctgcgttcaacaatatgattcctcatgtgaat
caaggaagttcgttgcgaggaatcacccctgatcttgctcccaatattgctcctagaaat
tatgctgtgcctcctacaagttatgtgggctcagcttacccagctgtaccaggtctgcag
taccccatggcatatcctgggggaatcatgaaccaccgtctgttgactggttcacctggt
tcagtgccacaagcaaacataaacagtaattcttcatcatcttcccctgttggtacaaat
tcaggagggcatattgaaggtccacctggtgcaaatctatttatttatcacatacctcaa
gaattcggtgatcaagagttggctaatgcttttcaaggatttggcagggtcttaagcaca
aaggtttttgttgacaaagcaaccggagttagtaaatgtttcggatttgttagttacgac
tctccagcagcggctcaaaatgcaataaacatgatgaacggatgccaattaggtggtaag
aaactcaaggttcagcttaagagagacaacaaacaaaacaaaccttattga
DBGET
integrated database retrieval system
