Gossypium hirsutum (upland cotton): 107936888
Help
Entry
107936888 CDS
T04793
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107936888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107936888
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107936888
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
107936888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
107936888
NCBI-ProteinID:
XP_016725158
UniProt:
A0A1U8MHS4
LinkDB
All DBs
Position
D13:57025542..57027991
Genome browser
AA seq
195 aa
AA seq
DB search
MEEADEMVTPGEVLGRATDLKAGKGAYAASHNNTIYASLTGFRRIQAPPPASHDKRPTVE
VTGHKAHGPVPEPGSVVIARVTKVMARTVSADIMCVGPKSVREKFTGIIRQQDVRATEID
KVDMHLSFRPGDIVRAVVLSLGDARAYYLSTAKNELGVVSAESSAGATMVPISWTEMQCP
LTGQIELRKVAKVVN
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcagatgagatggtaacgccaggagaggtattaggaagagccactgatctg
aaagcagggaaaggagcgtacgccgcctctcacaacaacaccatctacgcttcccttacc
ggcttccgccgcatccaggcccctcctcccgcttcccatgacaagagaccaactgtggag
gtaactggtcacaaagcccatggtcctgttccagaacccggttcggttgtcattgcccga
gttactaaggtgatggctaggacagtatcagctgatataatgtgtgttggtccgaaatct
gtgagagaaaaattcactggtataattaggcaacaggatgttagagctactgaaattgac
aaagtggatatgcatttgtcatttcgtcctggcgatattgtcagagcagtagtgctgtct
cttggagatgcacgggcttattacctatccacggctaagaacgaattaggcgtcgtgtct
gctgaaagctcagctggtgcaacaatggttccgataagttggactgagatgcagtgccca
ttgactggccaaatcgagctaaggaaggtggcgaaggtcgttaactaa
DBGET
integrated database retrieval system