Gossypium hirsutum (upland cotton): 107936901
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Entry
107936901 CDS
T04793
Name
(RefSeq) LEC14B protein-like isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107936901
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107936901
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SCAP
WDR54
Beta-prop_IFT122_1st
Cytochrom_D1
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
107936901
NCBI-ProteinID:
XP_016725174
UniProt:
A0A1U8MHZ2
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Position
D12:complement(849550..853886)
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AA seq
488 aa
AA seq
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MFVTASGVDIDEMGYAMSRLEIESELFDGGNTVHEASSSTRPGKLFPKVDDEISQLTNLR
SGPNDRLHQLVPGKQQLPVSPVRMLAGRESNYSGKGRFSSADRCHMLSRYLPVNGPWLVD
QTTSRAYVSQFSADGSLFVAGFQGSNIRIYNVDRGWKVQKNILAKSLRWTVTDTSLSPDQ
RYLVYTSMSPVVHIVNVGSSTTESFANVTEIHEGLDFSSNDRRYSFGIFSVKFSTDGREL
VAGSSDDSIYVYDLEANKLSLRIMAHTADVNTVTFADKSGNLIYSGSDDNLCKVWDRRCF
VAKDKPAGVLVGHLEGITFLDSRGDGRYFISNGKDQTIKLWDIRKMSSDTSCNLGYRNFE
WDYRWMDYPPQARDLKHPSDGSVATYKGHSVLRTLIRCYFSPEYSTGQKYIYTGSHDSRV
YIYDVVTGAQVAVLKHHTSPVRDCSWHPHYPVLVSSSWDGDVVKWEFPGNGEAPVLANER
RVRRQYYD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttacagccagtggggttgacattgatgaaatggggtacgccatgagtaggcta
gagatagaatccgagttgttcgatggcggtaataccgtccatgaagccagtagcagtact
aggcccggcaaactgtttcctaaagtagatgacgagatttcccagcttacaaacctcaga
tcagggcctaatgatcgactgcatcaacttgtgcccggaaagcagcaattacctgtttcc
ccggtgaggatgttggcaggtcgagaaagtaattattcaggaaagggaaggttctcgtca
gcggatcgttgtcacatgcttagcaggtatttgcctgtaaatggtccttggcttgtggac
cagacgaccagtcgggcctatgtttctcaattttcagctgatggttctctatttgttgcc
gggtttcagggaagcaatattaggatatacaatgtggatagaggttggaaagttcaaaag
aacattcttgctaaaagtttgcgttggacagttaccgacacatccctttctccggatcag
cggtaccttgtttataccagcatgtcgcctgtagttcacattgttaatgttgggtcttct
accacggaatcctttgcaaatgtcacggagatccacgaaggattggacttttcttctaat
gatcgaaggtattcttttggaatattctccgtgaaattttcaactgatggacgagaactt
gtggctggaagcagtgatgactcgatatatgtttatgatctggaagcaaacaagctttcc
cttcgaattatggcacacacggctgatgttaacacggtaacctttgccgataaaagcggc
aatttgatatattccgggagtgatgataacctctgcaaggtgtgggataggcgttgcttt
gtagcaaaagataagccggcaggagtcttggtgggacacttggaaggtattacattcctc
gacagtcgtggggatggtcgttatttcatatcaaacggtaaagatcagactatcaagctt
tgggatatccggaaaatgtcctccgatacctcttgcaatttagggtatcggaatttcgaa
tgggattacagatggatggactaccctccacaggctagagatttgaaacacccaagtgat
ggatcagtggctacttataaaggtcactcagtgttgcgcactcttattcgctgttatttt
tcacccgaatacagcacgggccaaaagtacatttacaccggatctcatgattctcgggtt
tatatttatgatgtggtcaccggagcccaagttgcggtactgaagcaccatacatcacca
gtaagagactgtagttggcacccgcattaccctgtgttggtcagctcctcttgggacggg
gacgtggttaagtgggaattccctggtaacggagaagcgccggtccttgcgaacgagagg
agagtcaggaggcagtattacgattga
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