KEGG   Gossypium hirsutum (upland cotton): 107936901
Entry
107936901         CDS       T04793                                 
Name
(RefSeq) LEC14B protein-like isoform X1
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107936901
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107936901
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SCAP WDR54 Beta-prop_IFT122_1st Cytochrom_D1 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 107936901
NCBI-ProteinID: XP_016725174
UniProt: A0A1U8MHZ2
LinkDB
Position
D12:complement(849550..853886)
AA seq 488 aa
MFVTASGVDIDEMGYAMSRLEIESELFDGGNTVHEASSSTRPGKLFPKVDDEISQLTNLR
SGPNDRLHQLVPGKQQLPVSPVRMLAGRESNYSGKGRFSSADRCHMLSRYLPVNGPWLVD
QTTSRAYVSQFSADGSLFVAGFQGSNIRIYNVDRGWKVQKNILAKSLRWTVTDTSLSPDQ
RYLVYTSMSPVVHIVNVGSSTTESFANVTEIHEGLDFSSNDRRYSFGIFSVKFSTDGREL
VAGSSDDSIYVYDLEANKLSLRIMAHTADVNTVTFADKSGNLIYSGSDDNLCKVWDRRCF
VAKDKPAGVLVGHLEGITFLDSRGDGRYFISNGKDQTIKLWDIRKMSSDTSCNLGYRNFE
WDYRWMDYPPQARDLKHPSDGSVATYKGHSVLRTLIRCYFSPEYSTGQKYIYTGSHDSRV
YIYDVVTGAQVAVLKHHTSPVRDCSWHPHYPVLVSSSWDGDVVKWEFPGNGEAPVLANER
RVRRQYYD
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgtttgttacagccagtggggttgacattgatgaaatggggtacgccatgagtaggcta
gagatagaatccgagttgttcgatggcggtaataccgtccatgaagccagtagcagtact
aggcccggcaaactgtttcctaaagtagatgacgagatttcccagcttacaaacctcaga
tcagggcctaatgatcgactgcatcaacttgtgcccggaaagcagcaattacctgtttcc
ccggtgaggatgttggcaggtcgagaaagtaattattcaggaaagggaaggttctcgtca
gcggatcgttgtcacatgcttagcaggtatttgcctgtaaatggtccttggcttgtggac
cagacgaccagtcgggcctatgtttctcaattttcagctgatggttctctatttgttgcc
gggtttcagggaagcaatattaggatatacaatgtggatagaggttggaaagttcaaaag
aacattcttgctaaaagtttgcgttggacagttaccgacacatccctttctccggatcag
cggtaccttgtttataccagcatgtcgcctgtagttcacattgttaatgttgggtcttct
accacggaatcctttgcaaatgtcacggagatccacgaaggattggacttttcttctaat
gatcgaaggtattcttttggaatattctccgtgaaattttcaactgatggacgagaactt
gtggctggaagcagtgatgactcgatatatgtttatgatctggaagcaaacaagctttcc
cttcgaattatggcacacacggctgatgttaacacggtaacctttgccgataaaagcggc
aatttgatatattccgggagtgatgataacctctgcaaggtgtgggataggcgttgcttt
gtagcaaaagataagccggcaggagtcttggtgggacacttggaaggtattacattcctc
gacagtcgtggggatggtcgttatttcatatcaaacggtaaagatcagactatcaagctt
tgggatatccggaaaatgtcctccgatacctcttgcaatttagggtatcggaatttcgaa
tgggattacagatggatggactaccctccacaggctagagatttgaaacacccaagtgat
ggatcagtggctacttataaaggtcactcagtgttgcgcactcttattcgctgttatttt
tcacccgaatacagcacgggccaaaagtacatttacaccggatctcatgattctcgggtt
tatatttatgatgtggtcaccggagcccaagttgcggtactgaagcaccatacatcacca
gtaagagactgtagttggcacccgcattaccctgtgttggtcagctcctcttgggacggg
gacgtggttaagtgggaattccctggtaacggagaagcgccggtccttgcgaacgagagg
agagtcaggaggcagtattacgattga

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