Gossypium hirsutum (upland cotton): 107937293
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Entry
107937293 CDS
T04793
Name
(RefSeq) transcription initiation factor IIE subunit alpha
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107937293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107937293
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
107937293
Prokaryotic type
Archaeal type
TFE
107937293
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_SprT
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
107937293
NCBI-ProteinID:
XP_016725647
UniProt:
A0A1U8MFM3
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Position
A07:complement(12902665..12907119)
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AA seq
477 aa
AA seq
DB search
MSIEPFNRLVKLAARAFYDNVTTKAENQPKMGRGDNKGIAVVVLDALTRRQWVREEDLAL
KLHSKQLRRTLRLFEEEKLITREYRKETAKGAKLYNAAVAATVDGQPSGKEGEEKVKLHT
HSYCCLDYAQIYDVVRYRLHRMKKKLKDELEDKNTVQEYVCPGCSKRYNALDALRLISLE
DESFHCERCNGELVAERDKLAAEEVGEGDYDNARRRRRENLKDMLQKMEVQLKPLMEQIN
RVKDMPIPEFGTLLSWETRVGAAGHALNGAGSNDPYKNSQGYCGTPMPFLGDTKVEVAFS
GLDSKEDVKTESASTSLKVLPPWMIKQGMNLTKEQRGEVKQESKAEGSSSQPAFSDDKKS
TIGNDDKKNVQEDDKKNIQDEYLKAYYAALYKKQQELEEAEKKKQQPADTSLETDLSDST
KRQVGMKVKREDNDEEDDDINCEEDPFSISGSTTNNYKVDDLNVEAWRHLQVMTRMI
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgagccctttaacagattggtgaagcttgcagctcgagcattttatgataat
gtgacgacaaaagcagaaaatcaacctaagatgggtcgtggtgataataaagggattgct
gttgtagtacttgatgctcttacaaggagacaatgggttagggaagaagatttggcgttg
aaactacattcaaagcaacttcggcggactctacggctatttgaggaagaaaaattaatc
acccgcgaatataggaaagagacggctaaaggggcaaaactatataatgctgcagttgct
gcaacggttgatggtcaaccaagtgggaaagagggagaggagaaggttaaattacatact
cactcttactgttgtctggattatgcacagatatatgatgttgttaggtatagattgcat
cgtatgaagaaaaaactaaaggatgaactcgaggacaaaaataccgttcaggagtatgta
tgcccgggctgttcaaaacgatacaatgctttagatgcattgcgattgatttccttggag
gatgaatcttttcactgcgaaagatgtaacggagaattagtggctgagcgtgacaagtta
gcagcagaagaagtaggagagggagattatgacaatgcgagacgacggcgacgtgaaaat
ttgaaggacatgcttcagaaaatggaggtacaacttaaaccattaatggaacaaatcaac
agagtaaaagatatgcctattccagaattcggaaccctgctatcatgggaaactcgagta
ggtgctgctggtcatgctctaaacggtgctggttctaatgatccttacaaaaattctcag
ggttattgtggaacaccgatgccatttcttggggatacaaaggttgaagttgctttttct
ggtcttgatagcaaggaagatgtaaaaaccgagagtgcaagcacatccttgaaagttttg
ccaccttggatgataaagcaaggaatgaacctaacaaaggaacaacgtggagaggtcaag
caagagtcgaaggcagaaggcagttcatcacaaccggctttttcagacgacaaaaagtca
accattggaaatgatgataagaagaatgtacaggaagatgataagaagaatatacaggat
gagtatcttaaagcatattatgctgctttatataagaaacaacaagaactagaagaagcg
gaaaagaaaaaacaacaaccggcagatacgtctttagaaactgatctttcggactctacc
aagcgtcaagttggcatgaaagttaaacgtgaagacaatgatgaggaagatgatgatatt
aattgcgaagaagatcccttttcaatttcaggcagtacgaccaataattacaaagtcgat
gatttgaatgttgaagcgtggaggcatctgcaggtgatgacgaggatgatatag
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integrated database retrieval system
