Gossypium hirsutum (upland cotton): 107937319
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Entry
107937319 CDS
T04793
Name
(RefSeq) peroxisome biogenesis protein 2 isoform X1
KO
K06664
peroxin-2
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107937319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107937319
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
107937319
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
GAGA
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
107937319
NCBI-ProteinID:
XP_016725675
UniProt:
A0A1U8MFX3
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All DBs
Position
A06:complement(126282410..126286698)
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AA seq
345 aa
AA seq
DB search
MISLRSNPSTAPPPREDAWITSYQKLLPHWHSVSLSHQHSTLPISISRVNQFDAARLDIE
MSAMLKEQLVKVFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDE
RAVEIRENVRTGLEGPGLTVAQKMWYCIAAVGGQYIWARLQSFSAFRRWGDSEQRPLARR
VWGLMQRIEGLYKAASFGNLLLFLYTGRYRNLIERALRARLVYESPNMNRAVSFEYMNRQ
LVWNEFSEMLLLLLPLLNSSTVKSVLHPFSKNKSSSSTEDDSTCPICRASPTTPYLALPC
QHRYCYYCLRTRCAAAPSFRCSRCSEPVVAMQRHSSIVEHKTHNQ
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgattagtcttagaagcaatccatcaacagcaccaccgccacgagaagatgcatggatt
acttcttatcaaaagctacttcctcactggcactctgtttctctttctcatcagcattcg
acgctaccgatatcaatatctagggttaatcagtttgatgccgccagattggatattgag
atgtcagctatgttgaaagaacagttggttaaagttttctccttgatgaagccaggaatg
ttatttcaatatgaacccgaacttgatgcttttcttgagtttctcatttggaggttctca
atttgggtagataaacctactccaggaattgctcttatgaatttgaggtaccgagatgaa
cgtgccgtggaaataagagaaaatgtaagaacaggtttggaagggcctgggctaactgtt
gctcagaagatgtggtattgcattgccgcagttggtggtcagtacatttgggctcgttta
cagtcattctctgcttttcgtcgatggggtgattctgaacagaggccattggcacggcga
gtttggggtttgatgcaacgtattgaagggctttataaggctgcgtcatttggcaacctc
ctcttatttctttacacagggaggtataggaacctcattgaaagagctttaagagcaagg
cttgtctatgaaagcccgaatatgaatcgagcagttagctttgagtacatgaatcgccag
ttagtgtggaatgagttctcggaaatgctgttgctgcttctccctcttctaaactcttca
acggttaaaagtgttcttcacccgttctcgaagaacaaatcttcaagttctacagaggac
gattcgacttgtcccatttgccgggcaagtccaacaactccgtatcttgctctcccttgt
cagcataggtattgctactactgcctacgaacacgatgtgcggcagctccatcgttccgg
tgttcccggtgcagtgagcctgttgtggcaatgcaacggcacagcagcatcgttgaacat
aaaactcataatcagtaa
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integrated database retrieval system
