Gossypium hirsutum (upland cotton): 107937415
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Entry
107937415 CDS
T04793
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107937415
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107937415
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
107937415
NCBI-ProteinID:
XP_016725775
UniProt:
A0A1U8MG71
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Position
D04:7870273..7875789
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AA seq
466 aa
AA seq
DB search
MSTSSQPQFRYTQTPSKVLHLRNLPWECAEEELVELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNKSPGDTPGNVLLVTIEGVE
PNDVTIETIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLL
PDHVTSCYLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGLMQPVVGPDGKKQEP
QSNVLLASIENMQYAVTVDVLHTVFSASGTVQKIAIFEKNGGTQALIQYPDVTTAAVAKE
SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTISDPSLLATQVPGLPAAPNAWQ
NPQGVPVHLGTDYSASAAIQGQPLAGQVPAWDPNFQARLPYGSVPGQTYQSLTAPTYVNV
ARPAGSSPLSQPGASSMPMQQQQQPPWANVRQGGAAELGQPPYYSR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatcaagccaacctcagttccgttatacccagacgccatcgaaggtcctccat
ctccgtaatctcccatgggagtgtgcggaagaggaactcgtcgaactttgtaaacccttt
gggaagatcgttaatactaaatgcaatgttggcgccaatcgaaaccaagcttttgttgaa
ttcgcagacttaaatcaggctatttcaatggtttcatactatgcttcatcatcagaacca
gcacagattcgtggaaaaactgtgtatattcaatattcaaacagacatgaaattgtcaac
aacaaaagtcctggagatacccctggaaatgtgttgctggttaccattgagggtgtggaa
cctaatgacgtgaccattgagaccattcacttggtattttctgcatttggttttgtgcac
aagattgctacttttgaaaaggctgctggattccaggcattaatccaattcactgatgct
gaaactgcatcttcggcgaggaatgcattggatgggagaagtattcccaggtacttgctt
ccagatcatgttacttcttgttacctgagaatctcatattcagcacacactgatctgaat
atcaagtttcagtctcatcggagcagggactataccaatccttaccttcctgtgaatcct
actgcaatggaaggacttatgcagcctgtagttggtccggatggaaaaaagcaagaacct
cagagtaatgtgctacttgcttcaattgaaaatatgcagtatgctgtgacagttgatgtt
cttcacacggtgttctcagcatctggcacggtccaaaagattgccatatttgagaagaat
ggtggaacacaggcacttattcaatatcccgatgttacaaccgcagcagttgccaaagaa
tccttagagggacactgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcatacagtgataaaagtagagattacacaatctca
gacccgagtttgcttgcaacacaagttccgggattgcctgctgctccaaatgcttggcag
aatcctcagggtgttccggtgcaccttggtactgactattcggcttcagctgcaatacag
ggtcaacctcttgctggacaagttcctgcttgggatccaaattttcaggctaggctgcca
tatggatcagttcctggtcaaacatatcaatcgttgacagcccctacatacgttaatgtg
gcaagacctgcaggttcatcacccctttcacaacctggtgcatcttccatgcccatgcag
cagcagcagcagccgccatgggctaatgttagacaaggaggtgcagcggagctgggtcag
cctccttattacagtcgatga
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