Gossypium hirsutum (upland cotton): 107937450
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Entry
107937450 CDS
T04793
Name
(RefSeq) glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107937450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107937450
Enzymes [BR:
ghi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
107937450
Transfer RNA biogenesis [BR:
ghi03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
107937450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
RecX_HTH1
Motif
Other DBs
NCBI-GeneID:
107937450
NCBI-ProteinID:
XP_016725821
UniProt:
A0A1U8MG51
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All DBs
Position
D08:complement(3441807..3455803)
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AA seq
1072 aa
AA seq
DB search
MATLAFPLVISFLKPNAPYFSLLRLAKPNAILTAPPPPLNRRYFRRTTAASAVHTSSVQQ
QSSTDASDEPKKASVLTFQQAIQRLQEYWASVGCAIMQCSNTEVGAGTMNPLTYLRVLGP
EPWNVAYAEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIRSLSALGIDVSE
HDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLSPISVEITYGLERIL
MLLQGVDHFKKIQYADGITYGELFMENEKEMSAYYLEHASVDHIQKHFDFFEEEARSLLA
SGLPIPAYDQLLKTSHAFNILDSRGFVGVTERARYFGRMRSLARQCALLWLKTRESLGHP
LGVVSESVDHVCPKEVLEAAVKKVHHDPRLFVLEIGTEEMPPHDVVNASQQLKDLLLQLL
EKHRLNHGGIQAFGTPRRLVISVESLCPKQAENELEVRGPPALKAFDPQGNPTKAAEGFC
RRYAVPLDSLFRKADGKTEYVYARVKESAQFALEVLSEELPRMLAKITFPKSMRWNSQVM
FSRPIRWIMSLHGDAVVPFTFAGILSGNLSYGLRNTATATVMVESAESYCSIMKNAGLGI
DIEDRKKTILERSHLLAKSVNGNIAFQESLLNEVVNLVEAPVPVLGKFKESFLELPDDLL
TMVMQKHQKYFPITDDNGKLLPYFIAVANGAINEMVVRKGNEAVLRARYEDAKFFYELDT
NKRFKDFRTQLKGILFHEKLGTILDKMSRVESMVCKLSMGFGFEEDMLLIIKEAASLAMS
DLATAVVTEFTSLSGIMARHYALRDGYSEQIAEALFEITLPRFSGDVLPKSDVGIILAIA
DRLDSLVGLFAAGCQPSSTSDPFGLRRISYGLVQILVEKDKNMNLKHALELAADVQPIKV
DATTIEDVYQFVTRRLEQYLVDKGISPEVVRSALAERANLPCLAAKTAWKLEALSKGDLF
PKVVEAYSRPTRIVRGKEVDADIEVDATAFETNEERALWDTFLSVENKIHPGIEVDDFIE
VSSELVQPLEDFFNQVFVMVEDERIRKNRLCLLKKIADLPKGVVDLSVLPGF
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggctacccttgctttccccttagtcatttcctttcttaagcccaacgctccttacttc
tctctcctccgtctcgccaagcccaatgccatcctcaccgcgcctccgccgcctttgaac
cgccgctacttccgccgaacaaccgccgcctccgcagttcacacttcttcagttcagcag
cagtcctcgacagatgccagcgatgagccgaagaaagcttctgttctgacatttcaacaa
gctattcaaaggctccaggaatattgggcgtctgttggatgtgctataatgcaatgcagc
aacaccgaggttggagccgggactatgaatcctttgacatacttgagagttcttggtcca
gaaccatggaatgttgcgtatgcggaacctagcatccggccagatgacagtcgttatggg
gaaaatcctaacaggctccaacgccacactcaatttcaggttatactaaagcctgatcca
ggaaattctcaagacctctttattcgtagcctttcagcattaggtattgatgttagtgag
catgatatacggtttgttgaggacaattgggagagcccggtactgggtgcatggggtttg
ggctgggagatctggatggatggtatggagatcactcagttcacctatttccagcaggct
ggaagtcttcaattgtcaccaatatctgttgaaatcacatatggccttgagcgtatactt
atgttacttcagggtgtcgatcattttaagaaaattcagtatgctgatgggatcacatat
ggtgaacttttcatggaaaatgagaaggagatgagtgcttattatttagaacatgccagt
gttgaccatattcaaaagcattttgatttttttgaggaagaagctcgttccttacttgct
tcaggattgccaattcctgcgtatgaccagcttctgaagacatctcatgcttttaatatc
ttggactctagaggctttgttggagtaacagagcgtgctcgttatttcggtcgcatgcgc
agtttagcccgtcaatgtgctctactctggttaaagacacgagaatctcttggacatcct
ttgggtgttgtctctgaatctgttgaccatgtatgtcctaaagaggttctggaggcagca
gtcaaaaaggtgcaccatgatccaagattgtttgttcttgaaattgggactgaagagatg
ccacctcatgatgtagttaacgcaagccagcaacttaaagatttactgttgcagctactt
gaaaaacatagattgaaccatggtggcattcaggcttttggcactcctcgcagactagtg
atatctgttgaaagtctttgtccaaagcaagcagagaatgagcttgaggttcggggacct
cccgctttgaaagcctttgaccctcagggaaatcctacaaaggctgctgagggtttttgc
cgcagatatgctgttccactagattctttgttcagaaaggcagacgggaaaacagagtat
gtttatgcccgtgtaaaagaatccgctcaatttgctttggaggttttatctgaagaattg
cccagaatgcttgctaaaataactttcccaaagtcgatgcgttggaactcacaggtcatg
ttcagcagacctattcgttggattatgtccctccatggagatgcagtggttccatttaca
tttgctgggattttgagtggaaacttatcttatggtcttcgtaatactgcaacagctact
gtcatggtagaaagtgcagaatcttattgtagtataatgaagaatgctggacttggtatt
gatattgaggatagaaagaaaacaattttggagcgctcacatttattagcaaaaagtgtc
aacggaaatattgcttttcaggaaagcttgctcaatgaggttgttaatcttgttgaagca
cctgttcctgtgctcggaaagtttaaagagtctttcttagagcttcctgacgatctttta
actatggttatgcagaagcaccaaaagtattttcccattactgatgataatggaaagctg
ttgccctacttcattgcggtagcaaacggagcaatcaatgagatggtggtgagaaaagga
aatgaagctgttctcagagctcgatatgaagatgccaaatttttctatgagctggataca
aataaaagatttaaggatttccgtactcaactgaaggggattctttttcatgagaagtta
ggaacaattctggacaagatgtcacgagttgaaagcatggtttgcaagctaagcatgggc
tttggatttgaagaagatatgcttctgattattaaggaggctgcatcacttgcaatgtca
gatcttgctactgctgttgtcactgaatttacttcactctctggcataatggcccgtcat
tatgctcttagagatggctattcagagcagattgctgaggccttgtttgagataacactt
cctaggttttctggagatgtgctccccaaaagtgatgtgggaataattcttgcaatagct
gaccgacttgacagtcttgttggcttatttgctgctggttgtcagcctagctccactagc
gatccatttggcctaagaagaatctcttatggcctagtccagatactggtggaaaaggat
aaaaatatgaatttgaaacatgctctggaacttgctgctgatgttcagcccattaaagtt
gatgcaaccacaatagaggatgtatatcagtttgttacacgaagactagagcaatatctg
gttgataagggaataagtccagaagtggttcgttccgcccttgcagagcgtgctaacttg
ccttgtctagctgctaaaacagcatggaaattggaagccttgtcgaaaggagatcttttc
cccaaggtcgtagaagcttattctcgtccaactagaattgtccgtggaaaggaggtggat
gctgatattgaggtggatgctactgcatttgaaacaaatgaagagagagcattatgggac
actttcttgtctgttgagaacaaaattcaccctggtatcgaggttgatgacttcattgaa
gtatcctcagagctagtacaaccattggaagatttttttaatcaagtttttgtgatggtg
gaggatgaaagaattagaaagaacaggttgtgtttgcttaagaaaattgcagaccttcca
aaaggtgtggtagatctctcagttttgcctggattttga
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