Gossypium hirsutum (upland cotton): 107937555
Help
Entry
107937555 CDS
T04793
Name
(RefSeq) tRNA pseudouridine synthase Pus10-like isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107937555
Enzymes [BR:
ghi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
107937555
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107937555
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
107937555
NCBI-ProteinID:
XP_016725941
UniProt:
A0A1U8MGH0
LinkDB
All DBs
Position
A05:17826949..17830902
Genome browser
AA seq
566 aa
AA seq
DB search
MSNEVESPQVSDAMEVAQLSSLAAVDSHAGSCEAEMPSRLLNDAVRSLPYHVVKDLLSIG
VCSRCVLRILGTEDHIYCHSSFSQSMLCSVLEEVTSFKSEGDFQFCSVCSGILQLSYRDD
KETLVKMKSPNDMALVIAELVKKEGHQVDGFSLEVSIPQFILENESSLLSGMKKRYESEP
WFQERLLSKCVSVKDVLKFAITKPLETLLDTKASASSFRIRLTYTHKMALENSVERNQGF
KRRKIGTENGLQNVNDESVVANKDCSDYPANETIAVTGRSSLKVPIDKVSEPCHLVYLCY
RTHIYLCGRYLKYSRNVSQTRWIIDEERMGEASVEEIIGSNILPMCRGDNYKFHAAGRED
IDVRMLGSGRPFLLEIQNARQVPSKETVKEIESKINGLENKLVGVKNLQVVGSQGWTLMR
EGEAEKQKQYCALVWISRPLEDEDVCSISLLHDMQILQKTPIRVLHRRSPLEREKIIHWM
KIERIAESSQYFLLHLCTQAGTYIKEFVHGDFGRTQPRYYTKLKMISLYYQLVMIMEKHQ
VLLDDYSYHFLYYWINPRMQSRDIAA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgaggtcgagtctccgcaggttagcgacgccatggaggtggcgcaacttagt
agcttggctgcagtcgacagccacgccggttcttgcgaggcggagatgccgtcgcggctt
ctaaatgatgccgttcggtcattgccttatcatgtcgtcaaggaccttttgtctatcggg
gtgtgttctagatgcgttctacggatattgggtaccgaggaccatatttactgccattca
tcgttttcacaatcgatgctctgttcagttcttgaagaagtgactagttttaaatcagaa
ggcgattttcaattctgcagcgtttgctcgggtatcttacagttaagttaccgcgatgac
aaagaaacgttggtgaaaatgaagagtccaaatgatatggctttagtcattgcggagttg
gttaagaaagaaggccatcaagtcgatggattttctctagaagtttccataccacaattt
atcttagaaaatgaatcctcgttgttgtcaggtatgaagaagagatatgaatcagagcca
tggtttcaagaaaggttactttccaaatgcgtctctgttaaggatgttctgaaatttgct
ataacaaaaccccttgaaacgttattggatactaaagctagtgcaagctcttttcggatc
cgtttgacttacactcataaaatggcattggaaaattctgttgaaaggaatcagggattc
aaaaggcgaaaaataggcactgagaatgggttgcaaaatgtaaatgatgagtcagtagtt
gccaacaaagattgttctgattatcctgctaatgaaacaattgctgtcactggaagatct
tctttgaaagttcccatagataaggttagtgaaccttgccacttggtatacctttgctac
aggacgcatatttacctatgtggtagatatctgaagtactcaagaaatgtgagccaaaca
cgctggataattgatgaggaaaggatgggagaagcttctgttgaggagataataggtagc
aacatccttcctatgtgtcggggtgataattacaagtttcatgctgctggaagagaagat
attgatgtccgaatgttgggttcaggcaggccttttctgcttgagatacaaaatgcacgc
caagtcccatccaaagagactgttaaggaaattgaatcaaagataaatggcttggagaat
aaactagttggagttaaaaatcttcaagtagtaggcagtcaaggttggacactgatgcgt
gaaggagaagctgagaagcagaagcaatattgtgcattagtgtggatttctcgtccactt
gaggatgaagatgtgtgctccatatcattgcttcatgacatgcaaattctgcaaaagacc
ccaatacgggtgcttcatcgtaggagtccattggaacgcgagaaaattatacattggatg
aagattgagaggattgctgaaagctcccaatattttcttttgcatctctgcactcaggct
ggaacttatatcaaggaatttgttcatggtgattttgggcgcactcaacctaggtactac
actaaactgaaaatgatatcgttatactatcagttagtgatgataatggagaagcaccaa
gtattactagatgactattcttaccattttctttattattggatcaatcctaggatgcag
agcagagatattgcagcttga
DBGET
integrated database retrieval system
