Gossypium hirsutum (upland cotton): 107937618
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Entry
107937618 CDS
T04793
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107937618
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
107937618
Ion channels [BR:
ghi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107937618
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
107937618
NCBI-ProteinID:
XP_016726019
UniProt:
A0A1U8MGV6
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Position
D04:complement(662848..669782)
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AA seq
712 aa
AA seq
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MNYPPEKVVRFQDWNSEKTCEVHYTNNNGINSGKFTFAINSFSEKFQRGVESGSERIKAI
RKSFKSSSFNHVVAKGFGSSKKVLDPQGPFLQRWNKIFVLSCIIAVSIDPLFFYVPVVND
DKKCLALDEKMETTACVLRSFTDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDSQAIAK
RYLRSYFLIDVLAVLPLPQLVILIIIPEMSGLKSLNTKNLLKIVVLFQYLPRVFRIYPLY
KEVTRTSGILTETAWAGAAFNLFLYMLASHVFGASWYLFSVEREFTCWKGACGNNTTCHR
SFYCDNGDSYFRTLLNQSCPIQTPNTTLFNFGIFLDALQSGIVESKDFPEKFFYCFWWGL
QNLSSLGQNLETSTYVFEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRD
AEQWMSHRLLPENLRERIRRYEQYRWQETRGVDEENLLRNLPKDLRRDIKRHLCLALLMR
VPMFEKMDEQLLDAMCDRLKPVLYTEESYIVREGDPVDEMLFIMRGKLLTVTTNGGRTGF
FNSEYLGAGDFCGEELLTWALDPHSSSNLPISTRTVRALTEVEAFALMADDLKFVASQFR
RLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLREEENRLQDALANAGGSS
PSLGATIYASRFAANALRALRRNRSRKARVTERVPPLLLQKPAEPDFTAEEQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaattatccaccagagaaggttgtgaggttccaggactggaattcagagaaaacctgc
gaagtacattatactaataataatgggataaattcagggaaatttacatttgcaataaat
tcattttcagaaaagtttcaaagaggggttgaatctggttctgagaggattaaagcgatt
agaaagtcatttaaatctagttcattcaaccatgttgttgctaaaggctttggttctagt
aagaaagttcttgatccacaggggccattccttcaacgctggaacaagatatttgtatta
tcatgtataatagcagtctcaattgatccactgttcttttacgttccagtggttaatgat
gacaagaagtgccttgccttggatgaaaagatggagaccactgcttgtgtgctgcgttca
ttcactgatatcttctatataatccatattatttttcagtttcgtactggattcattgca
ccttcttctcgtgtatttggaagaggtgttttagttgaagattcacaggcaatagcaaag
aggtatctacggtcatactttttaattgatgttctagcagttcttcccctgccacagctg
gtgattttaattatcatacctgaaatgagcggattgaaatcattgaatacgaagaacttg
ttgaaaattgttgttctcttccaatatcttccaagagtttttcgaatttatccactgtac
aaggaagttacaaggacctctggcatactaactgaaactgcatgggctggtgctgcattc
aatctgtttctttacatgctagcaagccatgtttttggggcttcttggtacttgttttcc
gttgaaagggaattcacatgctggaaaggcgcctgtgggaataatactacatgccaccgc
tcattttactgtgacaatggtgattcttattttaggacattgctaaatcagtcatgcccc
atacaaacacccaacacaacgcttttcaattttggaatattccttgatgcccttcaatct
ggtattgtggagtcaaaagattttccagagaaatttttttactgtttctggtggggcctg
caaaacctaagttctctgggtcagaaccttgaaactagtacctatgtattcgaaatctgc
tttgcagttttcatttcgatctcaggcttggttctgttttcatttctcattggaaatatg
cagacatatttgcagtccacaactaccagattggaggagatgagagtgaaaagacgtgat
gcagaacaatggatgtcccaccgcttactacctgagaatctgagggagcggattagacga
tacgagcaatacaggtggcaagaaactagaggagttgatgaagagaatttacttcgtaat
ctccccaaggacttaagaagggacataaagcgccatctttgcttggctctgctcatgaga
gtgccaatgtttgagaaaatggatgagcaattactggatgcaatgtgtgaccgtctcaag
ccagttctctacacagaggagagctacattgttcgggagggagacccagttgatgagatg
ctcttcatcatgcggggcaaactattgacagtgacaacaaatggtggaagaactggcttc
tttaattctgaatatctgggggcaggagacttctgtggagaggaacttctcacatgggct
ctagatcctcattcttcatcgaacctccctatctcaacaagaactgtccgggcccttaca
gaagttgaagcttttgctctgatggctgatgacttaaagtttgttgcttctcagttccgt
cggcttcatagtaagcagctgcgccacactttcaggttctattcacagcagtggcgaact
tgggctgcttgttttatacaagctgcttggcgccgttatagcaaaaagaaactagaggaa
tctttgagagaagaggagaatagattgcaagatgctttagccaatgctggtgggagctcg
cctagtctgggtgccactatttacgcctcacggtttgctgccaatgcgcttcgtgcttta
cggcgaaaccgttctcgtaaggcaagagtaacagagagggtaccgcctctgctgcttcag
aagccagcagagcctgattttactgctgaagaacagtaa
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