Gossypium hirsutum (upland cotton): 107937731
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Entry
107937731 CDS
T04793
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03082
ATP-dependent chromatin remodeling
ghi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107937731
03083 Polycomb repressive complex
107937731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107937731
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
107937731
Histone modification proteins
HAT complexes
HATB complex
107937731
HDAC complexes
Sin3A-HDAC complex
107937731
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
107937731
PRC2.2
107937731
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
107937731
Heterochromatin formation proteins
Other heterochromatin formation proteins
107937731
Chromatin remodeling factors
NuRD complex
107937731
NuRF complex
107937731
NuRF complex (fruit fly)
107937731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR35_TULP_N
eIF2A
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
107937731
NCBI-ProteinID:
XP_016726179
UniProt:
A0A1U8MKQ8
LinkDB
All DBs
Position
A05:complement(3054881..3061413)
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AA seq
502 aa
AA seq
DB search
MESPQPQQQQQQGPKKRGRKPKPKEEKEQQQQQSASKMKEGKKAHQPSVDEKYTQWKSLV
PVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKP
RVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQSSRIVATHTDSPDVLIWDVE
AQPNRHAVLGATHSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITT
TATDPTKSPGSGGSIIKQNKPGEGNDKAADGPSLGPRGVFCGHEDTVEDVTFCPSSAQEF
CSVGDDSCLILWDARVGTGPTVKVEKAHNADLHCVDWNPHDDNLILTGSADHTVRMFDRR
NLTSNGIGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVGKKVERASR
SPSAPAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTLQIWRMSDLIYRP
EEEVLAELEKFKSHVISCATKA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcctcaaccccaacaacagcagcaacaaggtcctaagaagagaggtcgaaaa
ccaaagccaaaggaagagaaagaacagcagcaacaacaaagtgctagtaaaatgaaagaa
ggaaagaaagctcaccaacctagcgttgatgagaagtacactcagtggaagtctttggtt
cctgttctttatgactggcttgctaatcacaatctcgtttggccttctctttcttgccgc
tggggaccacagcttgagcaagctacttacaagaatcggcagcgtctctacctctctgaa
cagactgatggtagtgttccgaatactcttgtgattgctaattgtgaagttgtcaagcct
agggttgctgctgctgagcacatatctcagtttaatgaagaagcacgctcaccatttgtg
aagaagtacaaaaccatcatacatcctggagaagtcaacagaatcagggaacttccacag
agctctaggattgtggcaactcacactgatagtcctgatgttcttatctgggatgttgag
gctcaacccaaccgccatgcagttcttggagcaacccattctcgcccagatctgattttg
actgggcatcaagataatgctgaatttgctcttgcaatgtgtccaactgagccttatgtg
ctctctggagggaaggacaaatcagtggttttgtggagcatccaggaccacataacaaca
acggctacggaccctactaaatctcctggatctggcggatcaatcatcaaacaaaacaag
cctggggaaggtaatgacaaagctgctgatgggccttctttaggtcctcgtggtgtcttc
tgtgggcatgaggatacagttgaagatgtcacattctgtccatcaagtgcacaagagttc
tgtagtgtaggtgatgattcctgcctcatactatgggatgcacgagttggcactggcccc
actgtcaaggttgaaaaggcacataatgctgatctccattgtgttgattggaacccccat
gatgacaatcttatcctgactgggtctgcagatcatactgtacgtatgtttgatcgaaga
aatctgacttctaatggaattggatcacccatttacaagtttgagggtcataaagctgct
gttctatgcgtgcagtggtctccagacaagtcatctgtatttggcagttctgctgaggat
gggctcttgaacatttgggactatgacaaggttggcaagaaggtggaacgtgcttcaaga
tctcctagtgctcctgcgggactgtttttccagcacgctggacacagggacaaagttgtt
gacttccattggaatgcatctgatccatggactgttgttagtgtgtctgatgactgtgat
acaactggtggaggagggacattgcagatatggcgcatgagtgatctgatctataggccg
gaagaggaggttttagctgagctggagaaattcaagtcccatgtcatttcgtgcgcgaca
aaggcatga
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integrated database retrieval system
