Gossypium hirsutum (upland cotton): 107937767
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Entry
107937767 CDS
T04793
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107937767
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107937767
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
107937767
Protein phosphatases and associated proteins [BR:
ghi01009
]
HAD phosphatases
Fcp/Scp phosphatases
107937767
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
107937767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
107937767
NCBI-ProteinID:
XP_016726219
UniProt:
A0A1U8MKU9
LinkDB
All DBs
Position
D10:2178436..2185735
Genome browser
AA seq
973 aa
AA seq
DB search
MSMYKSVVCRGDEVLGEVEIYPQQQQLREEEEEYGGKITVMEEEMKEIRIGYLTQGSERC
PPLAVLHTITSTGICFKMESSKDNNYSSSFQDTPPLHLLHSECIRDNKTAVMPMGDCELH
LVAMYSRNSDRPCFWGFNVARGLYDSCLVMLNLRCLGIVFDLDETLVVANTMRSFEDRIE
ALQRKMNTEVDTQRAAGMMAEIKRYQDDKAILKQYAENDQVVENGKVIKVQSEIVQPLSD
NHQPIIRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCT
MAERDYALEMWRLLDPESNLINSKELLDRIVCVKSGLRKSLFNVFQDGICHPKMALVIDD
RLKVWDEKDQPRVHVVPAFAPYFAPQAEANNTIPVLCVARNVACNVRGGFFREFDEGLLQ
KIPEISYEDDIKDIPSPPDVGNYLVSEDDTSTSTANKDPPIFDGMADAEVERRLKEAISA
ASTVSSASINLDPRLASSLQFTMPSSSSVPLLAVQSSMASYPNMQFPQAAQVIKPVAPVV
SPEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDHTPPEPAFPPARPAMQVPV
SRAQSRGSWFSSDEEMSPRQLNRAVPKEFPLDSERMHMEKHRGPPFFPKVESPLPSERLL
RENQRLPKEALHRDDRLGLNHTPSSYHSFPGEEMPLGRSSSSHKDLDFESGRTIPSGETP
AGVLQDIAMKCGAKVEFRPALVASMDLQFSIEAWFAGEKVGEGTGRTRREAQRQAAEDSI
KSLANTYLSRIKPDTGSTQGDLSRSANTNENGFPGNLNLYGNQQSSKEESMPFSNAPELS
RLLDPRLEGSRRSMGSVTALKELCMMEGLGVVFQAQPPASNTLQKDEVYAQVEVDGQVLG
KGTGFTWEEAKMQAAEKALGSLRSMLGQFTQKRQGSPRSLQDMPSKRLKPEFPRVLHRMP
SSGRYHKNAPPVP
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgtacaaatcggttgtgtgtcgaggggatgaagtgttgggggaggttgagatt
tatccacaacagcagcagctaagggaagaagaagaagaatatgggggaaaaataacggtg
atggaagaagaaatgaaggaaatcaggataggatatttgacgcaaggcagtgagagatgt
ccaccactggcagtgttgcataccattactagtactgggatttgcttcaaaatggaatca
tcaaaggacaacaactactcatcttcatttcaagacacgcctccgcttcatcttttgcac
tccgaatgtatcagagacaacaagactgcagtaatgcctatgggagattgtgagctccat
ttggttgcaatgtattctaggaatagcgataggccctgtttctggggattcaatgttgca
aggggactctatgattcttgtcttgtcatgttgaacctaagatgtttaggaattgtattc
gatctggatgaaactctagttgttgcaaatacaatgcggtcattcgaggacagaatagag
gctttgcagcgaaagatgaacaccgaggttgatacacaacgtgctgcaggtatgatggcc
gagattaagcgttatcaagatgataaggccatattaaagcaatacgcagagaatgatcaa
gttgttgaaaatgggaaggtgattaaggttcagtctgagattgttcaacccttgtctgat
aatcaccaacctattattcgacctctcattcgattacaagagaaaaacataattttgaca
cgcatcaatccacagattcgtgatactagtgttcttgtgagactgagacctgcatgggag
gatctgcgaagctacttgactgcaagagggcgtaaacggtttgaggtttatgtttgtaca
atggctgaaagagattatgctttggaaatgtggagacttcttgatcctgagtcaaatttg
ataaattcaaaagaattgttggatcgtattgtctgtgtcaagtctggtttgaggaaatca
ttattcaatgtctttcaagatggcatatgccatcccaaaatggcattggttattgatgat
cgcttaaaagtttgggatgagaaggatcagcctcgtgtgcacgttgttcctgcatttgct
ccatattttgctcctcaagctgaggcaaataatactattccagttttgtgcgttgcgaga
aatgttgcctgcaatgttagaggtggttttttcagagaatttgatgaaggccttctgcaa
aaaattcctgaaatttcatatgaagatgatattaaagatattccttcgcctcctgatgtg
ggcaactatttggtctctgaggatgacacttctacttcgaccgcaaacaaagatccacct
atatttgatggcatggcagatgctgaggttgaaagaagactaaaggaggcaatttcagca
gcgtcaacagtctcttcagcaagcattaacctagatccaaggctggcttcttctcttcag
ttcaccatgccatcttctagttcagttccattgttggcagttcagtcatcaatggcatca
tatccgaacatgcagtttcctcaggcagcacaagtgattaaaccagtggctcctgttgtt
tccccagaaccaagcttgcaaagttccccggctagagaagaaggtgaggttccagaatca
gaattggatcctgatacaaggaggaggcttctgatattgcaacatgggcaagataccaga
gatcacacaccacctgaacctgcatttccccctgcgagacccgcaatgcaagttccagtt
tcacgtgctcaatcacgtggaagttggttttcttctgatgaggagatgagcccacggcaa
ctgaaccgagcagttcccaaagaatttcctttagattctgagcgaatgcatatggagaag
catcggggtcctccttttttccctaaggttgagagtcctcttccatcagagagacttctt
cgtgaaaatcaaagattaccaaaagaggcacttcatagagatgatcgtctggggttaaac
catacaccgtctagttatcattcttttccaggtgaggagatgccccttggtcgatcatct
tctagtcataaggatcttgactttgaatctggacgaactattccaagtggagaaactcca
gccggagttttacaagatattgccatgaagtgcggagccaaggtggaattcagaccagct
ttggttgctagcatggacctgcaattctccattgaggcttggtttgctggggagaaagtt
ggtgaaggaactgggagaacaagaagagaagcgcaacgtcaggctgcagaggattctata
aaaagcttagctaatacatatttgtcacgaattaagcctgatactgggtctacacaaggg
gatttaagtaggtcggccaacacaaatgagaatggctttcctggtaatttgaatttgtat
gggaaccagcaatcctctaaagaggaatctatgccattttcaaatgcaccggaactgtct
aggcttcttgatccaaggctagaaggctccaggagatctatgggttcagtcactgcactt
aaagaactatgcatgatggagggccttggggtagtttttcaagcacagcctcctgcatct
aatacattgcagaaagatgaagtatacgcacaggttgaagtagatgggcaggttttagga
aaagggactggtttcacatgggaagaggctaagatgcaggctgctgaaaaggcccttgga
agtctaagatcaatgctcggtcaatttactcagaaacgtcaaggttctccaaggtcattg
caagatatgccaagtaaacgcctaaagcctgagtttccacgtgttctacaccggatgccc
tcttctggtagatatcacaagaatgctcctccggttccttga
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