Gossypium hirsutum (upland cotton): 107937809
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Entry
107937809 CDS
T04793
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107937809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107937809
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
107937809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
107937809
NCBI-ProteinID:
XP_016726273
UniProt:
A0A1U8ML77
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Position
D03:134735..143724
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AA seq
1217 aa
AA seq
DB search
MGSIKPLPDAVRSSVRSASILFDLTRVVEELIFNSLDAAASKVSVFLSVGSSYVKVVDDG
SGISRDGLVLLGERYVTSKLNHLSDLDAASSSFGFRGEALASVSDVALVEIVTKAYGRPN
GYRKVIKGSKCLYLGIDDDRKDTGTTVVVRDLFYNQPVRKKQMLSSPKKVLHSVKKCVFR
IALVHPMVYFNLIDIESEDELLSVHPSSSPLPLLMSGLGIEDCACLQKLNASDGSLKLSG
YISGPCDDFTSKAFQYVYINLRLVCKGPIHKLLNNMATSFESLHPEKKANNWTKNGKRSR
SQVVPSYIIKISCPPSFYDLTFEPSKTYVEFKDWRPVCTLIETAVQHLWRKNISYADGLG
QAETLKEDANILNVAEDFFDGSSVDLEFATRKRTKKYQPSSSLDKLTIDNLFLMDHEDTP
FEECNGNTAQFKDQQNDMKFVHWTDYSLQSLGDFLSKGGSIVNQRSDWHLWSSDNNILEE
DHFLENRFIASGRPNYHVNDNNISSKLGNESLKFESCVTNETVRSVFPFDSHELCNDLQF
RKNISKPFMQSCSFQRNRPLDRELVESDVGVDSPIDSLKTKRKWVCSNDGFNMMEVDFSD
QTFDHLSKTAWQDGPKLVRTNNIPTDCDVLRRASVKLFLSCGDVSVEENGLVSGSVMLAE
NLASGHQSLSLGLCSGTSNPFAQFSYKNAIEGSFKSEKRTNFGHFSDGEDEDNQFGVDLI
SRGSSQEKCIYDFPNTEQGIGYAESSREFSEHLQQYNLKHKFSPEQFNVVIENGDWPCSD
SSINEYKRQRDCFRYQDFGKNFRPKERSRRSQSAPPFYIRKRRFISLHHCLQTSEESTSN
EVHGPYTFLETGYKKPPQLSSGLHNGCFEPNFGKNRSNMSNKPDKVQSPIVQKCDKIEQP
YCREDPELVPVQVFPSYGNQDPLISGTKWRKTRNNKLYDADNEDTLLDIASGFLNLVAGS
LVPKSISKKCLTEAKVLQQVDKKFIPIVADGTLAIIDQHAADERIQLEELRRKVLSGEGK
SVAYLDTEKELILPEMGYHLLDNYSEQIRHWGWICDFHPQDSRSFKKNLNLIHRKPAVVI
LLAVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVSRILNSKACRGAIMFGDSLLPSE
CSLIVEELKQTSLCFQCAHGRPTTAPLVNLEALHGQIAKMQVRDDEGRELWHGLCRQGVS
LERASLRLRAAADEIPN
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggggagtattaagcccttgccagatgctgttcgtagttcagtgcgttctgcctctatc
ttgtttgacctcactagggttgtggaggagctcattttcaacagcctcgatgctgctgcg
tcaaaggtgtcagtctttctaagtgttgggagcagctatgtcaaagtggtggatgatgga
tctggtatttctcgggatggattggtgctactgggagaaagatatgtaacgtccaaactt
aaccatctgagtgatttggatgctgccagcagtagctttggctttcggggagaagcttta
gcttctgtatctgatgtagctttggtagaaatagtaacaaaagcttatggaagaccaaat
ggatatcgcaaggtgataaaggggtccaagtgtttgtatcttggaattgatgatgacagg
aaagatacgggcacaacagttgttgtgcgtgatttattttacaaccaacctgttcggaag
aaacaaatgctatccagcccgaagaaggtgttgcactctgttaaaaagtgtgtattcaga
attgctcttgttcacccaatggtttacttcaatcttattgatattgagagtgaggatgag
cttctctctgtgcatccttcctcttcccctttgcctcttctgatgagtggtcttggaatt
gaggactgtgcttgtctgcagaagctgaatgctagtgatggttccctcaagctttcaggc
tacatatctggtccttgtgatgattttacttctaaggcctttcaatatgtctatatcaat
ttaagacttgtctgcaagggtcccattcataagttgctgaacaacatggctacgagtttc
gagtctttacatccagagaagaaggctaataactggaccaagaatggaaaaaggagtaga
tctcaagtggttccatcatacataattaagattagctgcccaccatctttctatgattta
acctttgaaccatcaaagacatatgtcgaattcaaggattggagacctgtatgtacctta
attgagacagcagttcaacacctctggaggaaaaatattagttatgctgatggattagga
caagctgaaaccctgaaggaagatgcaaatattttgaatgttgcagaagatttttttgat
ggatcatccgtggacttggaatttgcaacgaggaagaggactaaaaagtatcaaccatct
tcttcattggacaagctaaccatagataatttgtttcttatggaccatgaagatacgcca
tttgaggagtgcaatggaaatactgcacaatttaaagatcagcagaatgatatgaagttt
gttcattggactgactattctttgcaaagtttgggtgatttcctttccaaaggtggctcc
atagtaaaccaaaggagtgattggcatctttggtcatctgataacaatattttagaagaa
gatcacttcttggaaaatagatttattgcttcaggaagaccaaactatcatgtgaacgac
aataatataagttcaaagttaggtaatgaatccctcaagtttgagagttgtgtgaccaat
gaaacagttaggagtgtttttccttttgatagtcatgaactttgcaatgacttgcagttt
aggaaaaatatcagcaaaccttttatgcaaagttgctccttccaaagaaaccggccactt
gacagggagttggttgaaagtgacgtaggagttgactcaccaattgatagccttaagaca
aaaaggaagtgggtctgctcaaatgatggctttaatatgatggaagttgatttcagtgac
cagacatttgatcacctttcaaagactgcatggcaggatggacccaagcttgtaagaaca
aataacattcctacagattgtgatgttttaagaagagcttctgtgaagttgtttctgtca
tgtggagatgtttctgttgaagagaatggcctagtatctggttcagtcatgctagctgaa
aaccttgcctctggtcatcagtccttaagtttgggattgtgttcaggaacctcaaacccc
tttgcacaattcagttataagaatgcaatagaagggagcttcaaatctgagaaaaggact
aactttgggcatttctctgatggtgaagacgaggacaaccaatttggtgttgatctaatc
tcaaggggctccagccaagaaaaatgcatctatgatttcccaaacactgaacaaggaatt
ggctatgctgaatccagtagagaattctctgagcaccttcaacaatacaatctaaaacat
aaattttctccagaacaattcaacgtagtaattgaaaacggagattggccttgctcagac
tcaagtattaatgaatataaaaggcaaagagattgctttcgttatcaagattttggaaaa
aactttaggcctaaggaaagatcaagaagaagccagtcagctcctccattttacatccgg
aagaggaggtttatctccttacatcattgtttgcagacatcggaggaatctacttctaat
gaagtccatggtccatacacctttttagagactggttataagaagcctcctcaactttct
tctggtttgcacaatggatgctttgaacctaattttgggaagaatagatcaaatatgagt
aacaaaccagacaaggtgcagagccccatagttcaaaaatgtgataagattgaacaacct
tattgccgagaggatcctgaacttgttccagtgcaagtatttccctcgtatggaaatcag
gatcccctaatttctggaaccaaatggagaaaaacaaggaataacaaattatatgatgct
gacaatgaagatactttacttgatatcgcttctggattccttaatcttgttgctggatca
ttggttcctaaatcaattagtaaaaagtgtctcacagaggccaaggttctgcaacaggtg
gataagaaattcatcccaattgtagctgatggaacacttgctattattgaccagcatgct
gcagatgaaagaattcaactagaagaacttcgtcgcaaggtcttatctggtgaagggaag
tcggttgcctatttggatacagagaaagagctgatcctgccagagatgggatatcattta
ctggacaattattctgaacaaataagacattggggttggatctgtgactttcacccgcaa
gattcaagatccttcaagaagaatttgaaccttattcatcgtaagccagctgttgtcata
cttcttgcagtaccttgcattttaggtgtcaatttatctgatgttgatctattggaattt
cttcaccagcttgctgatacagacggatcatcaacaatgcccccatctgttagtcgcatt
cttaattccaaagcatgccgaggtgcaattatgttcggagactccttgcttccttcagaa
tgttccttaattgttgaagagctaaagcagacctcgctgtgcttccaatgtgctcatggg
cgaccaaccactgccccgcttgtgaatttggaggcattgcatgggcagatagctaagatg
caagtgagggatgatgaaggcagggagttatggcatgggctatgccgacaaggagtgagc
cttgaaagggccagcttgcggttaagagcagctgctgatgaaataccaaactaa
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integrated database retrieval system
