Gossypium hirsutum (upland cotton): 107937837
Help
Entry
107937837 CDS
T04793
Name
(RefSeq) ubiquitin domain-containing protein DSK2b isoform X1
KO
K04523
ubiquilin
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107937837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107937837
03051 Proteasome [BR:
ghi03051
]
107937837
Membrane trafficking [BR:
ghi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
107937837
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
107937837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
Ubiquitin_2
UBA_7
STI1-HOP_DP
Rad60-SLD_2
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
107937837
NCBI-ProteinID:
XP_016726308
UniProt:
A0A1U8MLB0
LinkDB
All DBs
Position
D03:complement(194079..198069)
Genome browser
AA seq
546 aa
AA seq
DB search
MGGGDINASKEAASKDVGDAVTVSINCSSGSKFSVQANLDSTVDSFKALLARNCGVPADQ
QRLIYKGRILKDDQTLRSYGLEADHTVHLVRSVAPTAPPLTTNAAGSIGSGALSTSQTNT
TSVDLDDAGALEAGGAGLSASLFPGLGDSAGLFGAGLPNFEQLQQQLTRIPNIMREISNM
PAVQNLMNNPEILYNLIMNNPQTREIIDRNPELAHILNAPSVLRQTFEAARNPELMREVI
RNTDRAMSNIESSPEGFNMLRRMYETVQEPLLNATTMTGTTGNGGSNPFSSLLGTQGGNQ
ARDGSTNQPTSDSGTTPNANPLPNPWSSSEAGGSQTNTRRSDPGVDARPQAPAGLGGLGL
PAFEGLFGAMQDSNSLNQLMQNPAISQMMRSLLSSPQYLNEVLSLSPQLQNMLGSNSQPR
EMMQNSQFLRQLTSPEMMQQLLTLQQTLFSQLSRPQSTQEPAQTGGGAGTLNMGLEAMMT
MFSGLGTGSLGVPNRSDVPPEQLYATQLSQLQEMGFIDTRENIQALIASAGNVHAAVERL
LGNPGQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggtgatattaatgcttctaaggaagcggccagcaaagacgtcggtgatgct
gtcaccgtcagtatcaattgttcatccggctccaaattctccgttcaggccaacctggat
tccaccgtcgattcgtttaaggcacttctggcgcgaaactgcggtgttcccgccgatcaa
cagcgtttgatttataaaggtcggatcttgaaggacgatcaaacccttcgaagctacggt
ttggaggcagatcacactgtccacttggttcgttctgttgcaccgacagcgccaccgctg
acaaccaatgcagctgggtcaattggttcaggtgctttgagcacttctcaaacaaataca
acatctgttgacttggatgatgctggggcattggaagccggaggggctggtctaagtgct
tcactgtttcctggacttggtgacagtgctggtttatttggagctgggctcccaaatttt
gaacaattacaacagcaattgactcgaatccccaacattatgagggaaatatcgaacatg
cctgctgttcagaatttgatgaataatcctgagatactgtataacttgatcatgaacaat
cctcaaacgcgagagataattgaccgaaatcctgagcttgcacacatacttaatgctccg
agtgttctccgtcaaacatttgaagctgcaagaaaccctgagctcatgcgtgaagtgatt
aggaatacggacagagcaatgagcaatattgaatcatcacctgaaggatttaacatgctt
cgccgtatgtatgaaactgttcaagagcctctcctgaatgcaactactatgactggtact
actggaaatggtggttcaaacccgttttcttccctcctgggaactcaagggggaaaccaa
gccagagatgggtcaactaaccagcccacctctgattctggaactactcccaatgccaat
ccactgccaaacccttggtcttcttctgaagctggaggttcccaaactaacacacggagg
tcggatcctggtgtggatgctaggccacaggcacctgctggtttaggtggtctgggtctt
ccagcgtttgaaggcttgtttggtgctatgcaggattctaattcactgaatcagttgatg
caaaatccagctatttcacaaatgatgcgaagcctcctgtccagtcctcagtacttgaac
gaggttcttagtctcagtcctcaacttcaaaacatgcttggttctaattctcaaccaaga
gaaatgatgcagaactctcaatttcttcgacagttgacttctcctgagatgatgcagcaa
ctattgactttgcagcagactcttttttcacaacttagtcggccacagtcaacccaggag
cctgcccagactggtggaggtgcaggaacgctcaacatgggtttggaagcaatgatgacc
atgtttagcggacttggaaccggcagcttgggtgttcctaatagatcagatgtacctcca
gagcaactatacgccacccagttgtcccaacttcaagaaatgggtttcattgacactcga
gaaaatattcaggcattaatagccagtgcaggaaatgttcatgctgcggtggaacggtta
ctgggaaatcctggtcagtaa
DBGET
integrated database retrieval system
