KEGG   Gossypium hirsutum (upland cotton): 107937978
Entry
107937978         CDS       T04793                                 
Name
(RefSeq) histone deacetylase 2 isoform X1
  KO
K11418  histone deacetylase 11 [EC:3.5.1.98]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ghi03036]
    107937978
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     107937978
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class IV HDACs
     107937978
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 107937978
NCBI-ProteinID: XP_016726488
UniProt: A0A1U8MLT7
LinkDB
Position
D13:complement(59791981..59796907)
AA seq 418 aa
MTIPLLTLSHQQPFWKFRTHRVIANTTESTRNLCKSTLYLFLALATPFIAYRCFNSFTMF
WSSSSSSSQPATKIDAGSLRRQRINSSKLYQPDASSKVPVIYSSYYDISFLGIEKLHPFD
SSKWGRICRFLMSEGYLEKKSIVDPLEASREDLLVVHTEAYLNSLNNSVNVARITEVPPV
AMLPNWLVQMKVLYPFRRQVGGTVLAAKLAMDRGWAINVGGGFHHCSGGRGGGFCAYADI
SLCIHFAFVRLNISRVMIIDLDAHQGNGHEMDFGNDERVYILDMYNPGIYPFDMTARNYI
NQKVEVVTGTATVDYLDQLDKALAVAGSNFAPELIVYNAGTDILDGDPLGGLKVSPEGVI
KRDEKVFRFARDRKIPIVMVTSGGYMKTSARVIADSIINLSNEGLIETNVHSGRKIMI
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgacgattcctttgctgacgctctcacaccagcaaccgttttggaagtttagaactcac
cgagtcattgcaaacaccaccgaatcaactcgtaatctctgcaaatcgaccctatatttg
ttcctcgcactcgccactcctttcattgcatatcgctgctttaactcctttacaatgttt
tggtcttcgtcttcgtcatcctctcaacccgctaccaaaatcgatgccggatctctccgc
cgtcaacgaattaactctagcaagctctatcagcctgatgcttcctccaaggttccagtt
atctactcttcttattacgatatcagcttcctcggaattgagaaactgcatccgttcgat
tcttcgaaatggggtcggatatgccgattcttgatgtcggaaggttacctggaaaaaaaa
tctattgttgatccattggaagcttcaagggaggacctacttgtggtgcatacagaagca
tacctgaacagcctgaataacagcgtgaatgttgccaggataactgaggttcctcctgta
gcaatgttacccaattggcttgttcagatgaaagttctttatcccttccgaaggcaggtg
ggtggaactgttctggcggctaagttagcgatggaccgaggatgggctatcaatgttggg
ggagggtttcatcattgcagtggtggaaggggaggtggattttgtgcatacgcagatatt
tccctttgcattcattttgcttttgttcggttaaatatatcaagggtgatgataattgat
ttagatgcacatcaaggaaatggtcatgaaatggattttggtaatgacgagcgtgtgtac
atcctggatatgtacaatccaggaatctacccatttgatatgactgctagaaattatatt
aaccagaaggttgaagtggtgactgggactgcaactgttgactatttggaccaattggat
aaagcacttgcggtagcggggagtaattttgcccccgagttgattgtttacaatgctgga
actgatattctcgatggagatccactgggtggattaaaggtcagtccagagggggtgatc
aaaagagatgagaaggtcttcaggtttgctcgtgatagaaagatccctattgtaatggtc
acatcaggtggctatatgaaaaccagtgccagagtcatagcagattccattataaacctc
tcaaatgaaggcttgatagagacaaatgtccacagcggaagaaaaataatgatataa

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