Gossypium hirsutum (upland cotton): 107937991
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Entry
107937991 CDS
T04793
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like isoform X1
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107937991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107937991
03036 Chromosome and associated proteins [BR:
ghi03036
]
107937991
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
107937991
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
107937991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
WDR54
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
107937991
NCBI-ProteinID:
XP_016726501
UniProt:
A0A1U8MI35
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All DBs
Position
A07:complement(5847114..5850203)
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AA seq
456 aa
AA seq
DB search
MDQSDKLRLLQSYWYSPRRLHDSPTRYHFPGDRFLPNRSLMDLDRAHTLLTNKTTDFKSS
KCDEVYQQKLIESQSLNSEGKRIMVFKGSSKSSTKSIRFVDELRQEMATISDNKSKQAPY
RSIPKAEMIVLDAPGLLDDYYVNIMSWGKNNVLAVGLGPTLYLWNSVDQRIHKLFHVREE
DNWPTSITWSEEARTLAVGYTCSNLQLWDAESSKLIRSLQGHSERITSTAWNGHILTSGS
RDKSIINHDIRARNHLASSIKKHSDEVCGLKWSNEGDRLASGGSEKQLYIWEASKMSSSK
FLHLFTDHCAAVKALAWCPYQHNVLASGGGWNDRCIRIWNTQKGICIHSIETKAQISGLE
WNRHHKEILSSHGYSTGEDQNKLCLWKYPSMTKVGEFGNHEPRIINLCQSPDGVTVVSAV
ADETLRFWDVFGPPMTGTSMASDLQGLFSSRNSLIR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaagcgataagctgagactccttcaatcttattggtattctccaagaagactc
catgacagtcccactcgataccattttccgggggatcggtttttacccaacagaagtttg
atggatcttgatagagctcacactctgttgaccaacaaaaccaccgacttcaaatcttcg
aaatgcgatgaagtgtatcaacagaaactgattgagagtcagtctttaaattctgaaggg
aaaaggattatggttttcaaaggaagctcaaaatccagcacaaaatccattcgtttcgtt
gatgagttgagacaagaaatggctaccatatcggataacaagagcaaacaggctccatat
cggtccatccccaaggcagaaatgatagttttggatgcaccggggcttttggatgactac
tatgtgaacatcatgagttggggcaaaaacaacgttctagctgttggtttgggcccaaca
ctgtacttatggaactcagtagaccagaggatacacaagttgttccatgttcgtgaagag
gacaactggcctacaagcataacctggtccgaggaagcccgaactctagctgttggatat
acatgctccaacctacagctctgggatgctgaatcttcgaaacttattaggagccttcaa
ggtcatagtgaaaggataacatccaccgcatggaacggccacattttaacatcgggaagc
cgggacaagtccattatcaatcatgacattagagcacggaatcatttagcctccagcata
aaaaagcactccgatgaggtgtgcggtttgaaatggtcgaatgaaggtgataggttggca
agtggaggcagtgaaaagcagttatacatatgggaagcttccaaaatgagttcatcgaag
tttctccatctattcacagatcattgcgccgcagtcaaggcccttgcttggtgcccatat
cagcataatgttcttgcatctggaggaggctggaatgataggtgtattaggatatggaat
acacagaaaggaatctgcattcacagtattgaaaccaaagcacagatttctgggctggaa
tggaacagacatcacaaggagatattgagtagccatggatacagtacaggggaggatcaa
aacaaactatgcctctggaagtacccttcgatgacaaaagtgggggagtttgggaaccat
gagcccagaattatcaacctatgccagagccctgatggagtaactgttgtatcggctgtg
gcagatgagactcttcggttttgggatgtttttggaccccctatgactggaacttcaatg
gcatcggatcttcaaggtcttttctcttcaaggaattctctgataagatag
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