Gossypium hirsutum (upland cotton): 107938015
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Entry
107938015 CDS
T04793
Name
(RefSeq) syntaxin-32
KO
K08490
syntaxin 5
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107938015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107938015
Membrane trafficking [BR:
ghi04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
107938015
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
DUF3141
ANIS5_cation-bd
DUF16
Motif
Other DBs
NCBI-GeneID:
107938015
NCBI-ProteinID:
XP_016726529
UniProt:
A0A1U8MLQ7
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Position
A13:108147577..108152975
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AA seq
326 aa
AA seq
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MKAKAVQSSFRDRTQEFLSVSERLRKSITSGTSQNGPSSSSSRAEEKRSVVAHQSEFNRR
ASKIGFGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVVDLQLFC
NSKNEGGVSSDTSSHSTTVVDDLKNRLMSATKEFKDVLTMRTENLKVHENRRQLFSSTAS
KDSPNPFIRQRPLAAKSAAGASNNLPQWANGSASSSQLFPRKQVDAESQPFLQQQQQHQQ
QMVPLQDSYMQSRAEALQNVESTIHELGTIFNQLATLVSQQGEIAIRIDENMDDTLSNVE
GAQGALLKYLNSISSNRWLMMKIFLY
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaaagcggtacaatcgtcatttagggatcggacgcaagaatttctgagcgtg
tcggagaggttaaggaagtcgatcacgtctggaacgagccaaaatggaccgagtagcagt
agttcgagagcggaggaaaagagatctgtggttgcgcatcaatctgagtttaataggagg
gcttcgaagattggatttggaattcatcagacttcgcagaagctttcaaagttagcaaaa
ttggccaagaggacttcagtttttgatgaccctactatggaaattcaagagctcactgca
gttatcaagcaggatatcactgcccttaattctgctgtggtagacctgcaacttttctgc
aattctaaaaacgaaggtggtgtctccagtgacacatctagtcattcaaccacagttgtc
gatgacttgaagaatcgcttaatgagtgccacaaaagagtttaaagatgtcctcaccatg
cgaacagagaatttaaaggttcacgagaatagaagacagttattttcttccactgcttca
aaggattctccaaatccttttatacggcagcgccccctggctgccaaatcagcggcagga
gcttcaaacaaccttcctcaatgggctaatgggtctgcatcttcatctcagttgtttcca
agaaagcaggtggatgcagagagtcagccttttctccagcaacaacaacagcatcaacaa
caaatggttccattgcaagacagttacatgcagagcagagccgaagctcttcaaaatgta
gaatccacgattcatgagctaggcactatattcaaccagctagccactctggtttctcag
caaggagaaattgctatcaggattgatgagaacatggatgacacattatcaaatgtggag
ggagcacaaggagcattgctcaagtacctaaacagcatatcgtctaacaggtggttgatg
atgaagatatttttgtattga
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