Gossypium hirsutum (upland cotton): 107938019
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Entry
107938019 CDS
T04793
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT3-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00270
Cysteine and methionine metabolism
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
107938019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107938019
03032 DNA replication proteins [BR:
ghi03032
]
107938019
03036 Chromosome and associated proteins [BR:
ghi03036
]
107938019
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ghi02048
]
107938019
Enzymes [BR:
ghi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
107938019
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
107938019
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
107938019
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107938019
Prokaryotic defense system [BR:
ghi02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
107938019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Rrn7_cyclin_N
Motif
Other DBs
NCBI-GeneID:
107938019
NCBI-ProteinID:
XP_040973260
LinkDB
All DBs
Position
A07:5788981..5796096
Genome browser
AA seq
911 aa
AA seq
DB search
MPSTRRASNPMKDTDSTKNPTRSSQRNRKTVLEPENDEVVVVSEGENSEVSRGGKRKESS
ASGAVNTAKKSKPSVAKMTPLETGNGEAMAVDGTENGSKTTPKNSKKTKKDVAVNEDEEE
TKFLGEPVDDEEARRRWPKRYQGKGAKKVISKSSNGDSEEIIQARRHYTQAKVDGCMIFN
LYDDAHVKAEDGEDCYICKIVEMFEAVDGDLYFTAQWFYRAQDTVLKTLGHLIDKKRVFF
SQIEDDNPLDCLVAKLNIAKVSLNVDLEAKNKEIPSCDYYCDMLYKLEYSSFTNLPPEGK
TNASEEASSTISDDSPDIVNGANSGSEDASLLDLYSGCGAMSTGLCLGANMAGLRLVTKW
AVDINKYACESLQWNHPETTVRNESAEDFLALLKEWERLCASFSLSKSENLERQSFNSNA
NEDNVNDEEEEEEEEDEEDENEDGDGEVFEVEKFLAICYGDPKEKGERGLYLKVRWKNYG
PEEDTWEPLDGLGDCQECLKDFVTSGFKAKILPLPGDVDVICGGPPCQGISGFNRFRNKD
NPLQDEKNKQLQVFMEMVEYLKPKFVLMENVVDIVKFAEGYLGRYALSKLIHLNYQVRMG
MMAAGAYGLPQFRMRAFFWGARPNQKLPQYPLPTHDLVLRGVIPVEFEMNTVGWEEGKKI
ELEKKLLLEDAISDLPSVGNYEDKDEMDYDKDPKTEFQRFIRLRREEMPGFSSLNAKPTK
HLLYDHRPLQLNTDDYQRVCRVPKRKGANFRDFPGVIVNSGNKVEWDPNVERVYLESGKP
LVPDYAMSFVGGSSSKPFARLWWDETVPTVVTRAEPHNQAILHPVQDRVLSIRENARLQG
FPDYYKLFGPVKERYIQVGNAVAVPVSRALGYALGLAYQGVVSNDEPLTKLPPRFPNISE
KASSDSSQDNS
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcacgcgaagagcttctaatcctatgaaggacactgattcgaccaagaatccg
actcgctcgagccagcgtaatcgaaagacagtgttggagccggaaaatgatgaagtcgtc
gttgtcagtgaaggagagaacagtgaagtctctcgtggtggtaagcggaaggaaagctct
gcctctggagcggtcaacaccgctaagaagtcaaaaccaagtgtagctaaaatgacgcct
ttggagaccgggaatggtgaagctatggccgttgacggcactgagaacggcagcaaaacg
acaccaaaaaattcgaaaaagacgaaaaaggatgtagctgttaatgaagacgaggaggaa
acaaagtttttaggggaacctgttgatgacgaggaagccagacgccgatggccaaaacgc
tatcaaggaaagggagcaaaaaaggttatttcaaagagttcgaatggtgactctgaagag
atcattcaagctcgacggcactatacccaggcaaaagtggatggttgtatgatatttaat
ctttatgatgatgctcatgtcaaagctgaagatggagaagattgctatatatgtaaaatt
gttgagatgtttgaagcagttgatggagatttgtactttacagctcaatggttttacagg
gctcaagacacagtactgaaaacgttaggccaccttattgacaagaagcgtgtattcttt
tcacaaattgaagacgacaatcccttggattgtcttgttgcaaagcttaacattgcaaaa
gtatctttgaacgttgatttggaggcaaagaataaagagattccaagttgtgattattat
tgtgacatgttatacaaactggaatattcgtctttcactaacttgccgccagaagggaaa
acaaatgctagcgaagaagcttcatctacaatttctgatgacagcccagatatagtaaat
ggagctaacagtggttccgaggatgcttcattgctggacctgtattctggttgtggagca
atgtcaaccggcttgtgccttggggcaaatatggccggattaaggctagtgactaaatgg
gctgtggatatcaataaatatgcttgtgaaagtctccaatggaatcatccggaaacaacg
gtcaggaatgaatctgctgaagattttttagcattattaaaagaatgggaacggctgtgt
gcttcattttcattgtcaaaatctgagaatttggagaggcagtcattcaattcaaatgca
aatgaagataatgtaaatgatgaagaggaagaggaagaggaagaggacgaggaagatgaa
aatgaagatggtgatggtgaagtgtttgaagtagagaaatttcttgctatatgttacggt
gatccgaaagagaaaggggaacgtgggttgtacttaaaggttcgttggaagaattatggg
ccagaagaagatacatgggaacctttggatggattgggtgattgtcaagaatgcttgaag
gattttgttacaagtggcttcaaagcaaaaattctgcccttacctggtgatgttgatgtg
atttgtggagggcctccatgccaaggtatcagtggctttaataggtttagaaacaaggat
aaccctttgcaagatgaaaagaacaagcaacttcaggttttcatggagatggtggagtac
ttgaagccaaagtttgttttgatggagaatgttgttgacattgtaaagtttgcagaggga
tatcttggacgatatgctttgagtaagctaattcatttaaattaccaagtccgaatggga
atgatggcagctggtgcttatggtcttccccaatttcgtatgcgtgctttcttttggggt
gctcgtcctaatcaaaaattgccacaatatccacttcctacacatgatcttgtcctaaga
ggtgtcatacctgttgagtttgagatgaacactgtaggctgggaagaaggtaaaaaaata
gagttggaaaagaaacttctactagaagatgccatttctgaccttccatcagttggaaat
tatgaggataaagatgaaatggactatgacaaagatcctaaaacagagtttcaaagattc
atcaggttaagaagagaggagatgcctggtttttcgtcattaaatgcaaaaccaacaaaa
catttgctctacgatcatcgtccacttcaactcaacacggatgattaccaacgtgtttgc
cgggttcccaaaaggaagggagcaaattttagagactttccaggtgttatagttaatagt
ggcaataaagttgagtgggatcctaacgttgagagggtttatttggaatccggaaaacca
ttggtccctgattatgccatgtcttttgtcggcggctcatcaagcaaaccatttgctcgt
ctatggtgggatgaaactgtacccacagtggtcactagggcagagcctcataatcaggcg
atattgcatcctgtacaagaccgagttctctcaattcgcgagaacgcaaggttgcaaggc
ttccctgattactacaagctttttggccccgtcaaggaaaggtacattcaagttggaaat
gctgtagcagtgccagtttcaagggcattagggtatgccctgggattagcttaccaaggt
gtagtttcaaatgatgaaccattaacgaaacttcctccaagattccctaacatatctgag
aaagcttcttcggattcatctcaagataattcttaa
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