KEGG   Gossypium hirsutum (upland cotton): 107938020
Entry
107938020         CDS       T04793                                 
Name
(RefSeq) U6 snRNA phosphodiesterase-like isoform X1
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107938020
Spliceosome [BR:ghi03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    107938020
SSDB
Motif
Pfam: HVSL CRM1_repeat_3
Other DBs
NCBI-GeneID: 107938020
NCBI-ProteinID: XP_016726534
UniProt: A0A1U8MLR2
LinkDB
Position
A07:5797548..5801855
AA seq 281 aa
MFYSFCSSNIFFLITKKGSFDYLQSGQPSRVRSFPHVEGNYALHIYIPDTFFEWPQFFIN
NIELNELPFFLFTLLIISVFIQSISKKEMGQFLKRVSSVVPNLHVVDIDVPLDTLCKEEH
KLEQVALGREFHISLGRTVPIRVHQIDSIVTMLCQKLQFQKRYWIDFNKWEVFINDDRTR
TFLSLEVVTGGLPEITKQIQAVNEVYKLHNLPEFYKDPRPHISLAWALGHVSGSFKKVVE
QETKSSGFRGSLQSRICTSKVGGIECKIGNRTHIICKSPNQ
NT seq 846 nt   +upstreamnt  +downstreamnt
atgttttactctttttgctcatcaaatatttttttcttgataacgaagaaaggatctttc
gattacttacaaagtggtcagcccagtagagtgagaagcttccctcacgtcgaaggcaac
tatgctttgcacatttacattccggatactttttttgaatggccacagttctttatcaat
aatattgaattgaatgaattgcctttttttttatttactctgttaattatttcagttttt
atacagtctatatcaaagaaagagatgggtcaatttttgaagagagtttcatccgtggtt
cccaatctccatgttgtggatattgatgttccattggatacactgtgtaaagaagagcat
aaacttgaacaagtggcactaggaagggaattccatataagtttaggaaggacagttcct
attagagttcaccagattgactctattgtgacaatgctttgccaaaaacttcaatttcaa
aagcggtattggattgattttaacaaatgggaggtttttatcaatgatgatcgaacgcgc
acctttctttcacttgaagtcgttacaggaggattacccgagataactaagcaaattcag
gctgttaacgaggtttacaagcttcacaatcttcccgagttctataaggatccaaggcct
catatatcattggcttgggcactaggtcacgttagtggttcctttaagaaagtggtcgag
caggaaacaaagtcatccggctttagaggttccttacagagtcgtatttgtacaagtaaa
gttggtggcattgagtgtaaaattggtaatagaacacatataatatgtaaatctccgaat
caatga

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