Gossypium hirsutum (upland cotton): 107938061
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Entry
107938061 CDS
T04793
Name
(RefSeq) plant UBX domain-containing protein 10 isoform X1
KO
K18726
FAS-associated factor 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107938061
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107938061
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBX
FAF1
DUF6739
Motif
Other DBs
NCBI-GeneID:
107938061
NCBI-ProteinID:
XP_016726583
UniProt:
A0A1U8MM29
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Position
A12:complement(87011293..87014099)
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AA seq
392 aa
AA seq
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MSLTIRGRAKARDQPSCNGFFCRMVCLPKCIFGGFSRVTGRRNQYQPSELQLQHPQLLQP
PAVPEDWAFLVSFEQQYGTTHPFFYACSFMQALKIAEDEHKLMFMYLHSPEHPFTPSFCS
RTLSSELVVQFLDANFVCWGAIADRGEGLQMAATLQPASFPFCAVIAPVAGNNMAVLQQM
EGPIDPAELVEILQRTMEEQGSAFGTTVRGREEEHMRARIKEEERIKARAKEQEKLRADR
QLREEQDAAYFVALQRDQEKENLRNARAQKSIEASNQTNYQNPGQMHREKQLGKPRQSSS
VGEAQYKETTTHGKDTQILIRFPGGERREHNFSCIDKILSIYRYIDSLGLPGIANYRLIS
SFPRRLYSFDQMGMTLKDAGLHPRASLFVELL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgacaataagaggcagggcgaaagcaagagaccaaccctcttgcaatgggttt
ttttgtcggatggtatgccttcccaaatgcatatttggagggttttcaagggtaacgggt
agaagaaaccaataccagccatcggaattacagttgcaacatccacaactactacagccc
ccagctgttcccgaagactgggcttttttggttagttttgaacagcaatatggtaccaca
catccatttttctatgcatgtagttttatgcaggctctaaagatagcagaggatgagcac
aagctaatgttcatgtatctacactccccagaacatcccttcactccctcattttgttcg
aggactttgagttcagagttggtagttcaatttcttgacgcaaattttgtgtgctgggga
gcaatcgcagatagaggagaaggtttacaaatggccgcaactctacagcctgctagcttc
cctttctgtgcagtaattgccccagttgcgggcaacaacatggcagtgctgcaacagatg
gagggcccgattgatccagctgaattggttgagattctacaaaggacaatggaagagcaa
gggtcagcttttggcactactgtaagaggaagggaggaagaacatatgagggcaaggatt
aaggaagaggaaaggataaaggctagggctaaggagcaagaaaagttgagggctgatcgt
cagttgcgagaagaacaagatgctgcatattttgttgctttacagagagaccaagaaaag
gaaaatctgaggaatgcaagagctcaaaaatcaatagaagcttccaatcaaacaaattat
cagaaccccggacagatgcatagagagaaacaactaggtaaaccaaggcagagctcatct
gttggagaagctcagtacaaagaaacaactactcatgggaaagatactcagatattaatt
cgttttcccggtggtgaaagaagagagcacaacttttcttgcatagataagatcctctca
atttacagatacatagattcattaggactgcccggaattgcaaattatagattaatatca
agcttcccaagaagattatatagttttgatcaaatgggaatgactttgaaagatgctggt
ctacatcctagagcaagcctgttcgtggagcttctttga
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