Gossypium hirsutum (upland cotton): 107938081
Help
Entry
107938081 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107938081 isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107938081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107938081
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107938081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
DUF6882
Motif
Other DBs
NCBI-GeneID:
107938081
NCBI-ProteinID:
XP_016726618
UniProt:
A0A1U8MM65
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MRRGKIAPDGNEARKRSEKGDSKSLNAYFKQRKSRTEDFKCRDLEGENQKQIRESGNENK
GKPGKGFFACYLLTSLSPRHKGHTYIGFTVNPLRRIRQHNGEIGSGAWRTKSRRPWEMVV
CIYGFPTNVSALQFEWAWQHPRESEAVRQAAATFKSFSGVTNKIKLAYTMLTLPAWQSLN
ITINYFSTKYTNHSASCPSLPEQMKVKVSPMDELPCYTEPNEIEYKDDCDNLDEYDEVSD
TCETVPETYPNEVVIVSADNLHSIIHEACHEQSEHIEEHGTRKPGESSNLGVGNVESLVF
IDPPTSKATSIATGLTVVNAAECADMSIAGKESLRGMRFKYAVEADEDPQPSVKEVKEKP
STTDEEYEKLGDTCTFGVYHRQPFDVICSPVRASSSVFTSLSNEETAEGTNVSIIEKECR
IQKQFSAFVAASGDQQSWRKEKPLTTEVAVLKEHVPSFDVTREPEVIDLLTPSPSYRVRP
CTKKRRISKFSPEIIDLT
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagaagggggaaaattgccccagatggcaatgaagcgagaaagaggagcgagaaagga
gactccaaatccctcaatgcctatttcaagcagaggaagtcacgaacagaagacttcaaa
tgccgggatcttgaaggagaaaatcagaaacaaataagagaatcgggaaatgaaaataag
ggcaagccgggaaaagggttcttcgcttgctatctgctaacctctctcagccctcgtcat
aaaggccacacctatatcggatttactgtgaacccactgcgtcgaataagacagcacaat
ggggaaatagggagtggtgcttggaggacaaagagccgacgcccgtgggaaatggttgtg
tgcatatatggttttccaaccaatgtatctgctcttcagtttgagtgggcctggcagcat
cctcgagaatcagaggccgtgaggcaagcagctgcaacttttaaatccttctctggtgtc
accaataagataaaacttgcatatacgatgctcaccctccctgcctggcagagcttgaac
atcacgataaactacttctcaaccaaatacacaaatcattctgctagttgcccaagcttg
ccggagcagatgaaagttaaagtttcaccaatggatgagctcccctgctatactgaacca
aatgagattgaatacaaagatgattgtgataacttggatgaatatgacgaagtcagtgat
acatgtgaaactgttccagaaacatatccaaatgaagtggttattgtttcggcagataat
ttgcatagcatcattcatgaggcttgtcatgaacaatctgaacacattgaagaacatggg
acaagaaaaccaggggagtcatccaatcttggagtcggtaatgtagagtcactagttttc
attgatccccctactagcaaggcaacctcaattgctactggcctcactgtggtaaatgct
gctgaatgtgcagatatgagcattgctgggaaggagtctttgaggggcatgcggtttaaa
tatgctgtggaagctgatgaagatccacaaccatcggtaaaagaggtaaaagagaaacca
tcaactactgatgaggaatatgaaaagctaggggacacttgcacttttggtgtatatcac
aggcagccatttgatgtcatttgttcaccagtacgagcatcttcctcagtttttactagc
ctttctaatgaagagacagctgaaggaaccaatgtaagcattattgagaaggaatgtcgg
attcagaagcaattttcagcttttgtagcagccagtggagatcaacagtcatggagaaaa
gagaaaccattgaccactgaagttgcagttttgaaggaacatgtccctagtttcgatgtc
actcgtgaacctgaggttatagatttgttaaccccatctcccagctatagagtcaggcca
tgcaccaagaaaagaagaatttccaagttttctcctgagatcatagatctcacttga
DBGET
integrated database retrieval system
