Gossypium hirsutum (upland cotton): 107938103
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Entry
107938103 CDS
T04793
Name
(RefSeq) ABC transporter B family member 13 isoform X2
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107938103
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107938103
04147 Exosome [BR:
ghi04147
]
107938103
04090 CD molecules [BR:
ghi04090
]
107938103
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107938103
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107938103
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107938103
CD molecules [BR:
ghi04090
]
Proteins
107938103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_16
Zeta_toxin
ABC_ATPase
AAA_21
DUF87
RsgA_GTPase
AAA_30
DEAD
AAA_23
AAA_15
nSTAND1
Motif
Other DBs
NCBI-GeneID:
107938103
NCBI-ProteinID:
XP_016726660
UniProt:
A0A1U8MIN1
LinkDB
All DBs
Position
A06:complement(153631..158561)
Genome browser
AA seq
1242 aa
AA seq
DB search
MEEIELSHHQESVPKPEQSSDLTRRKPVSFLGLFSAADKLDCALMVFGSIGACIHGAALP
VFFVMFGRMIDSLGHLSSDPHKLSAQVSEHAIYLVYLGLVVFASAWIGVAFWMQTGERQT
ARLRLKYLQSVLRKDISFFDTEARASNIIFHISSDAILVQDAIGDKTGHAFRYLSQFIVG
FAIGFTSVWQLTLLTLAVVPLIAIAGGAYTIIMSTLSEKGEAAYAEAGKIAEEVISQIRT
VYAFVGEERAVKAYSSSLKNALKMGKRSGLAKGVGVGFTYGLLFCAWAFLLWYAGILVRH
SKTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGRAAAANIFSMIDTDSKPSGQADGET
ILPEVIGKIEFREVCFAYPSRPSGVFEKLSFSIDAGKTFAVVGPSGSGKSTIISMVQRFY
DPTSGSILLDGYDLKNLQLKWLREQMGLVGQEPALFDTTIADNILLGKEDADMQQVILAA
KAANAHSFIEELPNSYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAE
SELIVQQALDKIVSSRSTIIVAHRLSTIRDVDTIIVLKNGQVVESGSHMDLMSKNGEYAA
LVSLQISENIAISSSICHSDVSESSSFRQPQDSQNPGQDSRPFTAIELEQSCQNSSQQGS
APNPSIWELLKLNAPEWPYALLGSVGAILAGMEAPLFAFGITHVLTAFYSPDNIQIKEEV
ERVALIFVGLAILTIPIYMLQHYFYTLMGENLTARVRLSMFSAILSNEVGWFDLDENNTG
SLTAALAADATLVRSALADRLSTIVQNVALTMTAFVIAFALSWRIASVIIASFPLLIGAS
ITEQLFLKGFGGNYSHTYSRATAVAREAIVNIRTVAAFGVEDRISIKFASELNQPKKQAC
LRGHISGFGYGVSQLFAFCSYALGLWYASVLIKQNKSNFGDIMKSFMVLIVTALAVAETL
ALTPDIVKGSQALGSVFGILHRKTSIEPNDSTSNVVTEIKGDIEFRNVSFKYPMRPDVTI
FDNLNLKTSAGKSLAVVGQSGSGKSTVIALIMRFYDPVSGAVVIDGYNIKTLNLRSLRLR
MSLVEQEPALFSATIYENIKYGKEDASEIEIMKAARAAHAHRFISRMPEGYQTHVGNRGV
QLSGGQKQRVAIARAILRNPSILLLDEATSALDSESEKLVQEALDNLMEGRSTIIVAHRL
STIRNSDSIAVLEQGKVVEIGSHEQLTKKPGSVYKQLVSLQQ
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatagagctgagtcaccaccaggaatcggttccgaaaccggagcaatcgtcg
gatttgacaagaaggaaacctgtttcattcctcggtcttttttcagctgctgataaatta
gattgtgcattgatggtttttgggagtataggggcgtgcatacatggggctgctcttcca
gtgttctttgttatgtttggtcgcatgatagattctttaggacatttgtcttcggatcct
cacaagctgtctgctcaggtttctgagcatgctatatacttggtctacctcggtctcgtc
gttttcgcatcggcatggataggtgttgcattctggatgcaaaccggggagagacagacg
gctcgtttgagactgaaataccttcagtcggtcttaagaaaagatataagcttctttgac
actgaagctagagcttctaacataatttttcatatctcaagtgatgcaatccttgtccag
gatgccataggtgacaagacaggccatgctttccgttacctttctcaatttatcgttggt
ttcgccattgggtttacatctgtatggcagcttacactactcaccttagctgtagttcca
ctgatagccattgcaggcggagcttatactataattatgtcaactctatccgaaaaaggc
gaggctgcttatgccgaagctgggaagatcgccgaagaggttatttcgcagattcgcaca
gtatacgcatttgtaggagaggaaagagcagttaaagcatactctagttcacttaaaaat
gctcttaaaatggggaagagaagtggacttgcaaagggggtaggtgttggatttacatat
ggtctgctgttctgtgcatgggcctttcttctttggtatgccggcatactcgtcagacac
agtaaaacaaacggagggaaagcgtttacaacgattatcaatgtcattttcagtggattt
gctttaggccaagcagcaccaaaccttgctgccattgctaaaggccgggcagctgctgct
aatatcttcagcatgatagatactgactcaaagccttcaggacaggcagatggtgaaact
attttaccagaagtaattggaaaaatcgagttccgtgaggtctgttttgcttatccatct
cggcctagcggggtgtttgagaaattaagtttctcaatagatgctgggaagacgtttgcg
gttgttggtcctagtggttcgggaaagagtaccatcatttccatggttcaacgcttctat
gatcccacttcaggttctatattattggatggatatgatcttaagaatctgcagctaaaa
tggttgagagaacaaatgggattggtcggtcaagaaccagcactgttcgacacgacaatt
gccgataacatcctacttggtaaagaagatgcagatatgcagcaagttatattagctgcc
aaagctgctaatgcacattctttcattgaagaactacctaatagttataatacacaggtt
ggagaaggaggaactcagctttctggaggtcaaaaacaaagaattgctatagcaagagca
gtgctgaggaatcccaagatactgcttcttgacgaggctacaagtgctcttgatgcagaa
tctgaactcatagttcaacaggcactcgataagatagtgtcaagtcgatcaacgatcatc
gtggcgcatcgattatccactattcgagatgttgacactatcatcgttttgaagaatgga
caggttgttgagagtgggagccacatggatttgatgtctaagaacggagaatatgcggct
ttggttagcttgcaaatatcagaaaacattgcaatttcgagctctatatgtcattccgat
gtctccgaaagttctagctttcgacaacctcaagacagtcaaaatccggggcaggattca
agaccatttacagcaatagaattggagcaaagttgtcaaaactcatctcagcaaggttct
gctcctaatccatcaatatgggaactacttaaattaaatgcaccggaatggccctatgcg
ctacttggctcggttggtgcaattctggccggcatggaagctccgctatttgccttcgga
atcacgcatgtcttgactgcattttactctcctgataatattcaaatcaaggaagaggtt
gaaagagtggctcttatatttgttggtctggctattcttaccattcctatatatatgttg
caacactacttctataccttaatgggagagaaccttacggctcgtgtccgtttatcaatg
ttctcagctatcctttccaatgaggttggttggtttgatttggatgagaacaatactggc
tcattgacagcagctttagctgcagatgcaaccctcgtacgaagtgctttagctgatcgg
ctttccacaattgtccagaacgtagcacttactatgacagcatttgtaatagcattcgct
ttaagctggcgtatcgcatctgttatcattgcctcctttcctttactcataggtgcatcc
ataactgagcaactgtttcttaaggggtttggagggaattacagccatacgtactctaga
gcaactgctgtggcacgtgaagcaattgttaacattcgtactgtggctgcatttggtgtt
gaagaccggatttctatcaagtttgcctctgaattaaaccaaccgaaaaagcaagcatgc
ttacgaggtcatatatcgggttttggatacggcgtatcacagctctttgcattctgttcc
tacgcacttggcctttggtatgcatcggtgctaatcaagcaaaacaaatctaacttcgga
gatatcatgaagtccttcatggttttgatagtcacagcactggcagtagcagaaacacta
gctctcacaccggatatcgttaaagggtcgcaagcactcgggtccgtttttgggattctt
cataggaaaacatcaatagaaccgaatgattccacatcaaacgtagtaaccgagattaaa
ggtgacatagagttcagaaatgttagtttcaagtacccaatgagacctgatgtaaccatt
tttgacaacttaaacctgaaaacttcagctggaaaaagtctagccgtagttggacaaagc
gggtcagggaaaagcacagtcattgcattaattatgcggttttacgaccccgtttccggg
gcagttgtgatcgatggctacaatattaagacactaaacttaaggtcgctaaggctaaga
atgagtttagtcgagcaagagcctgcactgttctcagccacaatatacgaaaacattaag
tatggcaaagaggatgcatcagagattgagataatgaaagcagcaagagcagctcatgct
catcgattcattagccgaatgcctgaagggtatcaaacccacgtcggcaatcgaggtgtc
cagttatcgggtggccaaaagcagagagtggcaattgctagagcaatactaaggaaccct
tccattcttctcctggatgaagccacaagtgcattggactcggaatctgagaaactagtt
caagaagctctggataatctcatggaaggtcgtagcacaatcatcgtagcgcatcggtta
tcgactatacgtaattcggacagcattgcggtgttggaacaagggaaggtagttgaaatt
ggcagccatgaacaactgacgaagaaaccaggcagtgtttataaacagttggtcagttta
caacagtaa
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integrated database retrieval system
