KEGG   Gossypium hirsutum (upland cotton): 107938152
Entry
107938152         CDS       T04793                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03083  Polycomb repressive complex
ghi04120  Ubiquitin mediated proteolysis
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107938152
   04120 Ubiquitin mediated proteolysis
    107938152
  09126 Chromosome
   03083 Polycomb repressive complex
    107938152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107938152
   04121 Ubiquitin system [BR:ghi04121]
    107938152
   03036 Chromosome and associated proteins [BR:ghi03036]
    107938152
Membrane trafficking [BR:ghi04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    107938152
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     107938152
   Cul7 complex
     107938152
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107938152
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     107938152
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 107938152
NCBI-ProteinID: XP_016726716
UniProt: A0A1U8MIP8
LinkDB
Position
A06:complement(119992..120910)
AA seq 158 aa
MASTGRKIILKSSDGENFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEY
CKKHVEASKSEDRSASLDDDLKGWDADFVKVDQATLFDLILAANYLNIKGLLDLTCQTVA
DMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq 477 nt   +upstreamnt  +downstreamnt
atggcttctacgggtcggaaaatcatactgaagagctcagacggcgagaacttcgaggtg
gacgaggcggtggctctcgaatcacaaacgattaagcacatgatcgaggacgattgcgcc
gataacggcatccctctacccaacgtcaccagcaagatcctctctaaggtaatcgagtat
tgcaagaaacacgtcgaagcatcgaaatccgaggatcgttcagcctccctcgatgatgac
cttaaaggttgggatgctgatttcgtcaaggtcgatcaagccacccttttcgatctcata
ctggctgctaattacttgaacatcaagggcttgttggacctaacgtgtcaaactgtggca
gacatgataaagggaaaaacgcctgaggaaatccgcaagacttttaacattaagaatgat
tttactccggaggaagaggaagaggttcgtcgcgagaatcaatgggcgtttgagtga

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