KEGG   Gossypium hirsutum (upland cotton): 107938161
Entry
107938161         CDS       T04793                                 
Name
(RefSeq) replication stress response regulator SDE2
  KO
K25059  replication stress response regulator SDE2
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107938161
   03032 DNA replication proteins [BR:ghi03032]
    107938161
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107938161
Spliceosome [BR:ghi03041]
 Complex C
  Other components
   Complex C specific factors
    107938161
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    107938161
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    107938161
SSDB
Motif
Pfam: SDE2_2C SDE2 ubiquitin WVELL
Other DBs
NCBI-GeneID: 107938161
NCBI-ProteinID: XP_016726724
UniProt: A0A1U8MMA6
LinkDB
Position
A08:complement(101972434..101974711)
AA seq 448 aa
MEDDQISGDDIDMKDLNPRQLQLFVKLLNGETLSLLFPTLQVQVGDVKHRIQEFTQIPFN
FQRLIRGHQLKDDSVISHSNATLNLSLRLLGGKGGFGSLLRGAATKAGQKKTSNFEACRD
MSGRRLRHVNAEKRLEEWKAEEEQRKLEKIAEDFIKKKAKTGKKGVGDGEAEKYVEKYRE
QSARCVAVVEESVRAACQNGKRKTVPGGADPKRLKIWMGKRKVDESDSDSDYSSEDEDNE
ENEKSVVLNNGNHSDSSKGAEGSCGSVLGGKQDIDFSIGVSSGTGSEEEKEVVLHRSSES
CEDVDAMVEADVIAGSEAAHPEMPEQNGTKTQNQEEIVSQCLSADPVAENGVGSELIDGL
NCSSIPKPEVHKDTLVSNVNATEPENPLNFDDFNSSAEMEVLGLERLKSELQSRGLKCGG
TLQERAARLFLLKSTPLDKLPRKLLAKK
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggaagatgatcaaatcagcggagacgatatcgacatgaaggacctgaacccaaggcag
ttacagctgttcgttaaacttctcaatggtgaaactttgtcgctcctattcccgaccctt
caagtccaagtcggcgatgtcaagcaccgaattcaggaatttacccaaatccctttcaat
ttccagcgactgattcgcggccatcaactcaaggacgattcggtgatttcccactccaac
gctaccctcaacctttccctccggctcctcggtggcaaaggaggtttcgggtctctgctg
cgtggcgcagccacaaaggccgggcagaaaaagacaagcaatttcgaggcgtgccgagac
atgagcggaaggaggctaaggcatgtaaatgccgagaagaggttggaggagtggaaagcg
gaggaagaacagagaaagttggagaagatcgctgaagacttcataaagaagaaagcaaaa
actgggaaaaaaggagttggagatggagaggccgagaagtacgtagagaagtacagagag
cagtcggcgaggtgcgtggcggtggttgaagagtccgttagggcggcctgccaaaatgga
aaacggaagacagtgccgggaggagctgaccccaaaagattgaagatttggatgggaaag
aggaaagtggatgagagtgatagtgacagtgattatagcagtgaggatgaagataatgag
gaaaatgagaaatctgtagttttgaacaatgggaatcattcagattctagtaagggagct
gaggggagttgtggttcagttttggggggaaaacaggatatagacttttcaattggagtc
tcaagtggtactggttctgaggaagagaaggaggttgttctgcatcgaagctcggaatct
tgtgaagatgttgatgccatggttgaagcagatgtgattgctgggagtgaagcagctcat
cctgagatgccagaacaaaatggaactaaaactcaaaatcaagaggaaatagttagtcaa
tgtctcagtgctgatccggttgcggaaaatggagttggaagtgaattgattgatggactt
aattgttcttctatcccaaaaccagaagttcacaaagacacattagtttcaaatgttaat
gctacagaaccagaaaatccattgaactttgatgactttaattcttctgcagagatggag
gttcttggattggagcggttgaaatctgaactgcagtcacgtgggctaaaatgtgggggt
actttgcaagagcgagctgctcgtctgttcctgctaaaatctacccctttagataagctt
ccaaggaagctgcttgcgaagaagtga

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