Gossypium hirsutum (upland cotton): 107938242
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Entry
107938242 CDS
T04793
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1 isoform X1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107938242
Membrane trafficking [BR:
ghi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107938242
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_DOCK9
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
107938242
NCBI-ProteinID:
XP_040939120
UniProt:
A0ABM2Z9I9
LinkDB
All DBs
Position
A12:complement(96770064..96805374)
Genome browser
AA seq
1843 aa
AA seq
DB search
MDGNVATNGNGGGGYRFRRIPRHSLAHLKLDPLLDDNLEQWPHLTELIQCYKSDWIKDDN
KYGHYESISPDSFQNQIFEGPDTDIETEMQLASARQIKAEDATDDDLPSSSGRQFPNSNV
TKHFGQSPLPAYEPAFDWGNERSMIFGQRIPETPTTHYGSGLKISVKVLSLSFQAGIVEP
FYGTMCIYNRERREKLSEDFYFSVLPSEMQDAKVSLEPRGIFYLDAPSASICLLIQLEKP
ATEEGGVTPSVYSRKEPVHLTERERQKLQVWSRLMPYRESFAWAIVPLFDNSIAAASGGS
ASPSSPLAPSMSGSSSHEGVFEPIAKVTSDGKLGCSSGSSVIVEISNLKKVKESYTEESL
QDPKRKVHKPVKGVLKLEIEKHQTALAELDNISEGGSATNDSLDPGEPVADLMFSRSPGN
GLDGPQTSNSKWIAIDGKEVSGNGSNSHGNLDLCADDFQAFDFRTTMRNEPFLQLFHCLY
VYPLTVNLSRKRNLFIQVELRKDDADARRQPLEAIHPRDRGSSHQKYAHTQVAVGARVAC
YHDEIKVSLPAVWTPSHHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTHAQLRSEISLP
IIRELVPHYLLDSGKERLDYLEDGKNVFKLRLRLCSSLYPINERIRDFFLEYDRHTLRTS
PPWGSELLEAINSLKNVDSTALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNILTRVQ
QESVDDSERNRSLVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVL
AMAWFFLELIVKSMALEQTRLFYHSLPLDEDVPPMQLKEGVFRCIIQLYDCLLTEVHERC
KKGLSLAKRLNSSLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLIFLQII
CDHDLFVEMPGRDPSDRNYLSSVLIQELFFTWDHDDLSQRAKAARILVVVLCKHEFDARY
QKPEDKLYIAQLYFPLIGQILDEMPVFYNLNAAEKREVLIVILQIVRNLDDASAVKAWQQ
SIARTRLFFKLLEECLVHFEHRKPADGMLIGSSSRNPVGDAPTSPKYSDKLSPAINNYLS
EASRQEVRPQGTPENGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHP
ILRQKLELWEENLSAAVSLQVLEISEKFSAMAASHSIATDYGKLDCLSSIIMSFFSRNQP
LVFWKAFLPVFNNVFDLHGATLMARENDRFLKQVAFHLLRLAVFRNDNIRKRAVIGLQIL
VRSSFYFMQTARLRVMLTITLSELMSDMQVTQMKSDGTLEESGEARRLRKSLEEMADEVK
SSGLLKECGLPEDALLVTPENFKENRWSWSDVKSLSGSLLLALDASLEHALLGSVMSMDR
YAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVARN
DGVWSKDHVTALRKICPMVSSEITSEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAE
LYHFCASILELVIPVYKSRRAYGQLAKCHTLLTNIYESILEQESSPIPFTDATYYRVGFY
GERFGKLDRKEYVYREPRDVRLGDIMEKLSHIYESRMDGNHTLHIIPDSRQVKAEELQPG
VCYLQITAVDPVMEDEDLGSRRERIFSLSTGTVRARVFDRFLFDTPFTKNGKTQGGLEDQ
WKRRTVLQTEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGD
QLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCK
RAIRVHFRLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaacgttgctaccaatggcaacgggggcggtgggtatcgctttcggagaatt
cctcgacattcgctcgctcatctcaagctggatccattgcttgatgacaatttggagcag
tggccacatctaaccgaactcattcagtgctacaaaagcgattggattaaagatgataac
aaatatggccactacgaaagtatcagtcccgattcattccagaatcagatatttgaaggt
ccagatactgatattgagactgaaatgcagcttgccagtgctagacaaattaaggctgaa
gatgctaccgatgatgacttgccaagttcctcaggaaggcaatttcccaactctaatgtt
acaaagcattttggtcagtctcctctcccagcttatgaacctgcttttgactggggaaat
gaaaggtcaatgatatttggccaaaggatcccagaaacccctaccacacactatggcagt
gggttgaagatctctgtcaaagttctatcgctttcctttcaagctggaattgttgagcca
ttctatggaaccatgtgcatatataaccgggagagaagagaaaaattatctgaagatttt
tatttttctgttcttccaagtgaaatgcaggatgctaaagtgtctttagaacctcgtggg
atattctatttagatgctccatcagcatcaatctgtttgctaatccagttagagaagcct
gcaacagaagaaggcggtgtaaccccttcggtttattcacgtaaagaaccggtgcacttg
actgagagagagaggcagaagctgcaggtgtggtctcgtctaatgccttacagagagtct
ttcgcctgggccattgttccattatttgacaatagcatcgctgcagcttctggtggatct
gcttctcccagcagtcctcttgctcccagcatgtctggttcaagttctcatgagggtgta
tttgagcccattgctaaggtcacatcagatgggaaactgggttgctcaagtggtagttct
gttattgttgaaatatctaatctaaaaaaagtgaaggaaagctacactgaagagtcactt
caggatcctaaacgaaaagtacataaacctgtaaaaggtgttctgaaattggaaattgag
aaacaccagactgctctcgctgagctggataatatatcagaaggtggcagtgcgacaaat
gattccctggatcctggggaaccagttgctgatttaatgttttcaaggagtcctggaaat
ggtctggatggtcctcagactagcaactccaagtggatcgcaattgatgggaaagaggtt
tctggaaatggatctaacagtcatggaaatctagatttatgtgcagatgattttcaagct
tttgacttccgcacaacaatgagaaatgagccattcttgcagctttttcattgtctatat
gtgtatccgttaactgtgaatttgagtcggaaaaggaatctattcatacaagttgagcta
agaaaggatgatgctgatgctcggaggcagcccttagaggcaatccatccaagggatcgt
ggttcatcacaccagaaatatgctcacacacaagttgctgttggtgctagggttgcctgc
tatcacgatgagattaaagtttcacttcctgctgtctggacaccatcacatcacctgtta
tttacttttttccatgttgatcttcaaactaaacttgaagctccaaaaccagtagttata
ggatatgcagcacttccattatcgacacatgcccaattgcgatctgaaatttctttaccg
ataataagggaattggttccacattatctcctggattctggcaaggagaggttggattat
ttggaagatggaaaaaatgtattcaaattgcggttaagactttgttcatctctatacccg
attaatgagcgcatcagagatttttttcttgagtatgatagacacactcttcgaacaagc
ccaccttggggttctgaacttttggaggcaatcaacagcttaaagaatgtcgattccact
gctttgcttcagtttcttcacccgattctaaatatgcttctccatcttatagggaatggt
ggagaaacccttcaggttgctgcattcagagccatggttaatatcctgacaagggtgcag
caagagtcagttgatgattctgaacgaaatcgctctctagttaactatgtagattatgct
ttcgatgactttggtggtcgtcaacccccagtttatccgggcttgtctactgtgtggggt
agcttggctcgtagtaaggctaagggttatcgtgttggaccagtgtatgacgatgtgctg
gcaatggcttggttttttcttgagctaattgttaagtcaatggcattggagcaaacacgt
ctgttctatcatagccttccattagatgaagatgttcccccgatgcagttgaaagagggt
gtgttcagatgtataatccagctgtatgattgccttctaactgaagttcatgagcgttgt
aagaaagggctaagcttggcgaaacgattgaacagcagtctggcattcttttgttatgat
cttttatccattattgagcctcgccaggtttttgaattggtgtccttgtacctggacaag
ttttctggggtatgtcaatcagttctgcatgattgcaagctaatttttctgcagataata
tgtgatcatgatctttttgtggaaatgcctgggagagacccctcagacaggaactatctt
tcatctgtcttgattcaagagcttttcttcacttgggatcacgatgatttatctcagcgt
gctaaggcagctagaattttggtggttgttttatgtaagcatgagtttgatgctcggtac
caaaaacctgaagacaagctgtatattgctcaactatattttcccctcattggccagatt
ctagatgaaatgcccgtattttacaacttaaatgctgccgaaaagcgtgaagttttgatt
gttatcttgcaaatcgtgcggaatctggatgatgcatcagctgttaaggcttggcagcaa
agcattgctcgaactagattatttttcaaactcttggaggaatgtctggttcattttgag
caccgaaagcctgctgatggaatgcttataggaagcagttctcgcaatcctgtgggtgat
gcacctacatcaccaaagtattctgataagctttctcctgcaatcaacaattatttatct
gaagcatcaagacaagaagttcgacctcagggaactcctgaaaatggttacttgtggcag
agggtgaattctcagctgagctcccctagccagccatattccttgagagaagctctggct
caggcccaatcttctaggattggagcttcagcccaagcacttagagaatctttgcatcca
attttgcgacaaaaactggagctttgggaagaaaacttgagtgctgctgttagtcttcag
gttttagaaatatctgagaaattttctgcaatggcagcatcccatagcattgctactgat
tatggaaaacttgattgtttatcatctataattatgagcttcttttcccgaaatcagcca
ctggttttctggaaagcttttctgcctgtcttcaacaatgtatttgatcttcatggggca
acactaatggctagggagaatgatcgtttcttaaaacaagttgcctttcatcttcttcga
cttgcagtctttcgaaatgataatattaggaaaagagctgttattgggcttcagatactc
gtgaggagttcattctacttcatgcagactgcaaggttgagggtaatgctgactatcacc
ttgtccgagctaatgtctgacatgcaggtgactcagatgaagtctgatgggacacttgag
gaaagtggtgaagcacgaaggcttcgaaaatctttagaggaaatggcagatgaagtcaag
agctctggccttttgaaggaatgtggacttcctgaggatgctctattggtaactccagaa
aattttaaagagaacagatggtcctggtcagacgtaaaatctctctctggcagccttctt
ctggcccttgatgctagtctggagcatgcactgttgggctctgtaatgtccatggataga
tatgcagcagcagaaagcttttacaagcttgcaatggcatttgcccctgtcccagatctt
cacataatgtggttgctgcatttgtgtgatgcacatcaagaaatgcagtcttgggctgaa
gctgcacagtgtgctgtggctgttgccggtgttgtaatgcaggctcttgttgctagaaac
gatggtgtttggagcaaggatcatgtgacagccttacgtaaaatttgtcctatggtcagc
agtgaaatcacatcggaggcatcagcagctgaggttgagggatacggtgcttcgaagctc
actgttgactctgctgttaagtacctacaacttgcaaataaacttttctctcaagctgaa
ctctatcatttctgtgcaagcattttggaactcgttattccagtttataagagcagaaga
gcatatggacaactggctaaatgtcatacattgctcacaaacatctatgaatcaatcctt
gagcaggagtcaagccctatccctttcactgatgctacttactatagggttggattttat
ggtgagagatttggtaagctggaccggaaagaatatgtttaccgagaacctcgtgatgtg
cgcttgggtgatataatggaaaaacttagtcatatatatgaatctaggatggatggtaat
catacattgcacattattcctgattccagacaggtgaaggcagaggagttgcagcctgga
gtctgttacctgcagataacagctgttgatccagtcatggaagatgaagatttgggaagc
agaagggaaagaatcttttctctttctactggaactgtccgtgcacgtgtttttgaccgc
ttcttatttgacactccattcacgaaaaatggcaagacccaaggtggattggaagaccaa
tggaaaaggaggactgttcttcagactgagggctcattccctgcacttgtcaataggctc
ttggtgataaaatctgaatcacttgaattttctccggttgagaatgcgattggaatgatt
gaaactcgaacagcagccctacgaaatgagttggaagagcctcgtagttccgaaggagac
caactgcctcgtcttcagagcctgcaaagaattcttcaaggcagtgttgcagttcaagtg
aatagtggtgttctgagtgtgtgcacagccttcttgtctggtgaacctgccacaaggttg
cgttctcaggagctacagcaacttattgctgcactccttgaatttatggctgtttgcaag
cgggcaattcgtgtacacttcagactaataggagaagaagaccaagatttccacacacaa
ctagtgaatggatttcaatctctcacagcagagctatctcattacatccctgcaattcta
tcagagctctga
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integrated database retrieval system
