Gossypium hirsutum (upland cotton): 107938268
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Entry
107938268 CDS
T04793
Name
(RefSeq) U-box domain-containing protein 13-like isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107938268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107938268
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107938268
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
U-box type E3
107938268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
Neurochondrin
MLKL_N
zf-C3HC4_4
MCAfunc
zf-Nse
zf-C3HC4_2
Arm_2
HEAT_EZ
KAP
zf-C3HC4
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
107938268
NCBI-ProteinID:
XP_016726852
UniProt:
A0A1U8MJ81
LinkDB
All DBs
Position
A07:complement(17023879..17028727)
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AA seq
669 aa
AA seq
DB search
MEEEKGVLVQSLIDAVNQIASISDYRCSVKKEYCNLARRLKLLTPMFEEIRESKEQIPEE
TVKALLSLKEALISAKELLSFGSEGSKIYLVLEREQIMHKFLEVTAQLEQALRGISYENL
DISDEVKEQVELVLAQFRRAKGRVDAPDLELYEDLLSLYNKSDDAELDPEVLRRLAKKLQ
LVGIAELTQESLALHEMVSASGGDPGETFEKMSSLLKKIKDFIQTENPNLDAPAREKNLP
PSSSGQATTDGNRKTPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEQGHGTCP
KTQQALSSPALTPNYVLRSLIAQWCEANGIEPPKRPSTRPSKTTSACSPAERTKIEILLR
KLASSSPEDQRMAAGEIRLLAKRNADNRVAIAEAGAIPLLVSLLSTPDSRIQEHAVTALL
NLSICEDNKASIISSGAVPGIVQVLKKGSMEARENAAATLFSLSVVDENKVTIGASGAIP
PLVVLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPILMRLLTEPGGGMVDEALA
ILAILASHPEGKSAIGAAEAVPVLVGVIGNGSPRNRENGAAVLVHLCSGDQQHLAEAQEL
GVMGPLVDLAQNGTDRGKRKAAQLLERMNRFVEQQKLAQVQAEAEVQQPQSQSQTQQRRP
PSVENAIEG
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaaaggagtgctggtgcagagcttgatcgatgcggtgaaccaaatagct
tctatcagcgactacagatgctccgttaagaaggagtactgcaatctcgctaggaggctc
aagctgttgacgccaatgttcgaggagattagagaaagcaaagagcaaatccccgaagaa
actgttaaagctttgctctcgttgaaagaagctctcatttcggctaaggaactgcttagt
ttcggcagtgaaggcagcaagatttacctggttctagagagggagcagatcatgcataaa
tttcttgaagtaacagcgcaattggaacaagctttgagaggaatttcctatgagaatctt
gacatatcagatgaagttaaggaacaggtggagcttgtactagctcagttcaggagagct
aaaggtagagttgatgcgcctgatcttgagctgtatgaggatctattatcactgtacaac
aagagcgatgatgcagaactagatccagaggtactaaggagattggctaagaagttacaa
ttggtgggcatagctgaacttacgcaagaatcattagctctacatgagatggtttctgcc
agtggtggagatcctggtgaaacatttgagaagatgtcgagcttattaaagaaaatcaaa
gactttatacagacagaaaatcctaacttggatgctcctgcaagagaaaagaatcttcct
ccaagtagcagtgggcaagcaactactgatggaaatcgcaagactccagttataccagat
gatttccgctgtcccatatccctggagttgatgaaggatcctgtcattgtttcgactggg
cagacttatgaacgttcttgcattgagaaatggctggagcaagggcatggaacatgtcca
aagacgcaacaggcactcagcagccctgcccttacacctaattatgtattgcgtagtcta
atagctcaatggtgtgaggcaaatggtattgaaccacccaaaagacccagcactcgtccc
agtaaaactacatctgcctgctcaccagctgaacgtactaagattgaaattctcctccgt
aagctcgcatccagcagtcctgaagaccagagaatggctgcaggtgaaatccgtcttctt
gccaaacgcaatgcagataaccgtgtggccattgctgaagctggggccatacctctcctt
gtgagccttctttcaacacctgattcacgcatccaagaacatgctgttacagcacttctt
aacctttctatttgtgaagataacaaagcaagtatcatatcctctggagcagttcctggt
atagtccaggtgcttaagaaggggagcatggaagctagagagaatgcagcagccactctt
ttcagcctttcagtagttgatgaaaataaggtgacaattggtgcctcgggagcaatcccc
ccattagtggtactgctaagtgaaggaacgcaaaggggcaaaaaggatgcagcaacagca
ctcttcaacttgtgcatttaccaagggaacaagggaaaagcagtgagggctggtgttgtg
cctatattaatgcgtttgttgacagaaccgggtggtggaatggtggatgaggcattggcc
atactagcaatacttgcaagccatcctgaagggaagtctgccattggagcagcagaggca
gtgccggttttggtaggtgttattggaaatggatctccaaggaacagagagaatggagct
gcagttttggttcacctttgttccggagatcaacaacatttagcagaggcccaggaacta
ggagtgatgggtcctttggtagacttggcacaaaatggtacggataggggcaagcgcaag
gctgctcagttgttagagcgcatgaacaggtttgttgagcagcaaaaattggcacaggtg
caggctgaggccgaagtacagcagccccagtctcagtctcagacacaacagcgacgacca
ccctctgtggagaatgctattgagggctga
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