KEGG   Gossypium hirsutum (upland cotton): 107938269
Entry
107938269         CDS       T04793                                 
Name
(RefSeq) SEC12-like protein 2
  KO
K14003  prolactin regulatory element-binding protein
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107938269
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107938269
Membrane trafficking [BR:ghi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    107938269
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_EML_2 WD40 WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_EML WD40_like WDR90_beta-prop_4th KNTC1_N Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_Vps41 CFAP43_N BBS2_Mid PEP5_VPS11_N Beta-prop_NUP159_NUP214 Phage_Gene47
Other DBs
NCBI-GeneID: 107938269
NCBI-ProteinID: XP_016726853
UniProt: A0A1U8MMV7
LinkDB
Position
A07:17197611..17203365
AA seq 393 aa
MTDTSSDLQKYGVPFYGAGWVPYNHIKSKLASQEKIEEDKKEEKDPTPSNDDEITTPLNY
VVLAGGGGEGRSGIPNAIVVSHVNFTSNSLSDQPVVKHETGSDLPYRMTVHPHGDGIICA
FQQSCRLFEWKESNGNEAHKLGVKVSEKVLIQLEDVGQQLALTFNSEGSVLAVGGEDGSL
RVFKWPSMKIVLNEAQAHSSVKNLDFSCDGKFLVSLGSGLCRIWDVTSSKVVASLAKGND
EVFAFCRFSQINDKNPHLYIAAVTDYGGSILTYNTTTWKRIRSSRVVREAISAFNVSSDG
KFLAVGTVGGDLFIIDSANMRVQMMVKKAHLGLVTALTFSPDSRALVSASLDSSARLTPI
KDKTSSGGMTWMIILMVLLAIAVYFMKEKGIIP
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgacagacacctcctccgatctccaaaaatacggcgtgccgttttacggagccggatgg
gttccttacaaccacatcaaatccaagctcgcctcacaagaaaagattgaagaggataag
aaagaagaaaaagatccaactccatccaacgatgacgagatcactacacccctaaactac
gttgttctcgctggcggtggcggtgaaggccgtagtggcattcccaatgcaatcgttgtt
tcccacgttaatttcacctccaattctctctccgatcaacctgtggttaagcatgaaact
ggttctgatttgccttatcgaatgactgttcatccgcatggagatggcattatctgtgca
tttcaacagagctgcaggttgtttgagtggaaagaatctaacggaaatgaagcccacaaa
ctgggtgtcaaggtatcagagaaagttctgatccagttagaggatgttgggcaacagttg
gcactgacatttaatagtgagggttctgtactggctgttggtggtgaggatggcagttta
agggttttcaagtggcctagcatgaaaatagttctcaatgaagcccaggctcattcatct
gttaagaacttggattttagctgtgatggaaaatttcttgtgtcactgggaagtggcctt
tgtaggatttgggatgtaacttcgtcaaaagttgttgcttctctggcaaagggaaatgat
gaggtttttgccttctgcagattttctcaaattaatgataagaatccacatctgtatatt
gctgcagtcacagactatggtggaagtattttaacatataacacaaccacatggaaaaga
attcgctcaagccgagtagtccgggaagctatctctgcgttcaatgtctcgtctgatggg
aagttccttgcagttggaacagtcggaggagacctttttatcatagattctgccaatatg
cgggttcagatgatggttaaaaaagctcaccttggtttggttacagcattgacgttctcc
cctgattcaagggctttggtttctgcatcactggactcaagtgctaggttgaccccaatc
aaggacaagacgagtagtggtggaatgacatggatgatcatattaatggtgctacttgca
attgctgtgtactttatgaaggagaaaggaattataccctaa

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